Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 8e-15 seq1 95.1 8e-15 >seq8 Length=9380469 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| || || || || || || || || || Sbjct 4935970 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 4936029 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||| || | || ||| | || | || || ||||| || || | ||||| || Sbjct 4936030 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGCATTCCGCCGGA 4936088 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || |||||| | || || |||||||| || ||||| || | ||||| | ||| || Sbjct 4936089 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTGTCCGACTA 4936148 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 4936149 CAACATTCAGAAGGAGTCGAC 4936169 >seq1 Length=20238125 Score = 95.1 bits (104), Expect = 8e-15 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || ||||||||||| || || || ||||| || || || || | Sbjct 19807022 AAGATGCAGATTTTTGTGAAAACCCTCACTGGGAAGACCATCACGCTTGAGGTCGAGCCG 19807081 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| | || ||| | || | || | | || || || || | || ||||| Sbjct 19807082 TCGGACACGATCGAGAATGTGAAGGCCAAGA-TCCAAGATAAGGAGGGAATTCCTCCAGA 19807140 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| ||| | || || ||||||||||| |||| || | ||||| || ||| || Sbjct 19807141 TCAACAACGTCTGATCTTCGCCGGCAAACAGTTGGAGGATGGCCGCACGCTATCCGACTA 19807200 Query 23787 CAACATACAAAAAGAGTCCAC 23807 ||| || || || ||||| || Sbjct 19807201 CAATATTCAGAAGGAGTCTAC 19807221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338003952176468