Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 131 4e-25 seq2 114 3e-20 >seq1 Length=20238125 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || |||||||| || || || || || | |||||| |||| | || Sbjct 19807246 ACGAAGTCGCAACACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGATAGCGT 19807187 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | ||| || || |||||||| || |||||||| || || ||||| || Sbjct 19807186 GCGGCCATCCTCCAACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGAATTCC 19807127 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||||||| ||||| ||||| || | || || || | Sbjct 19807126 CTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAG 19807067 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||| ||||| || || | ||||| | || | ||||| || Sbjct 19807066 CGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGCATCTT 19807022 >seq2 Length=16623535 Score = 114 bits (126), Expect = 3e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || ||||| || || |||| ||||| |||| || ||| Sbjct 2043747 ACGAAGACGAAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 2043688 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| | || || || || || |||||||| Sbjct 2043687 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACC 2043628 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | || || || | Sbjct 2043627 CTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCAGACGGCTCGACTTCCAG 2043568 Query 225672 CGTGAT 225677 |||||| Sbjct 2043567 CGTGAT 2043562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192510252071474