Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq8 118 2e-21 seq1 89.7 1e-12 >seq8 Length=9380469 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || ||||| || || |||||||| |||| | || | |||||| Sbjct 4936184 AGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGCCCATCC 4936125 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| || || || ||||| || Sbjct 4936124 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 4936065 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | | || || ||| || ||||| ||||| || Sbjct 4936064 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTC 4936005 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || || ||||||| |||||| || Sbjct 4936004 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 4935970 >seq1 Length=20238125 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || || |||||||| || || || ||||| |||| || || | ||||| || Sbjct 19807233 ACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGATAGCGTGCGGCCATCCTCC 19807174 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | ||| ||||||||||| || | || || || | | ||||| ||||| ||||| Sbjct 19807173 AACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGG 19807114 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || ||| |||| | |||| || ||| || ||||| || || || || Sbjct 19807113 ATCTTGGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGCGTGATGGTCTTC 19807054 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || ||||| || | |||||| || Sbjct 19807053 CCAGTGAGGGTTTTCACAAAAATCTGCATCTT 19807022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153800532055941