Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 152 5e-32 seq1 118 1e-21 >seq8 Length=9380469 Score = 152 bits (168), Expect = 5e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | ||||||||| || || ||||||||||||||| ||||||| Sbjct 4936201 CGCCACCACGCAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 4936142 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | || |||||| | || || ||||||||||||||||| ||||| ||||| ||||||| | Sbjct 4936141 ACAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCG 4936082 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 ||| || |||||||||| ||| || ||||| | | || || | ||| | Sbjct 4936081 GAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGA 4936022 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || |||||||| || || || ||||| |||||||| || Sbjct 4936021 CCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 4935970 >seq1 Length=20238125 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || |||||||| || ||||| |||||||||||| || |||||||| Sbjct 19807251 CCACCACGAAGTCGCAACACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGAT 19807192 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||| ||||||||||| ||||| || ||||| || | ||| Sbjct 19807191 AGCGTGCGGCCATCCTCCAACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGA 19807132 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||| || ||| || ||||| | | ||||| || ||| ||| Sbjct 19807131 ATTCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACC 19807072 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | ||| || || || || || || || || || ||||||||||| || Sbjct 19807071 TCAAGCGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGCATCTT 19807022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462296077265200