Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq22281 104 2e-17 >seq22281 Length=11977 Score = 104 bits (114), Expect = 2e-17 Identities = 182/265 (69%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || || |||||| ||| ||| | ||| ||||| || ||||| Sbjct 3416 ATGTAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCATCGCAATCTGG 3475 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| || || || ||||||| || || || ||| | || |||||| | ||| Sbjct 3476 AACCCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTGGCTAAAGCGTTCCACCAGA 3535 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || |||||||||||||| ||| ||||| || || || | | || |||||| | Sbjct 3536 TTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGGAAATGAAGTGA 3595 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 |||| |||| | || | ||||||||| | ||| ||||| | ||| || || || Sbjct 3596 CGTTCGCTCGGTTTCAGCGCATCCCAGTCCTTCATATCCTTGGACAGATCAACCTCCTCC 3655 Query 17474 GGGGTCCAAAAACTAGCCACTGCCT 17498 ||||| || |||| | |||| Sbjct 3656 ACCGTCCAGAACGAAGCCTCCGCCT 3680 Score = 98.7 bits (108), Expect = 1e-15 Identities = 278/423 (66%), Gaps = 8/423 (2%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG-ACGT- 16855 ||| || ||||| || || || || |||| | ||||||||||| || ||| | || Sbjct 2894 ATCAGCCACAAACTCGATGTACTGCGACATCAGATCGCAGTTCATGCC---AAGCATGTC 2950 Query 16856 -ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACT 16914 || || || || | |||||| || ||||| || |||||||| || |||||| Sbjct 2951 AACGGGCAGTGCCTTCGTCAAGAACTCCTGCTCGATCACAACCGCATCGCGAATAATGTC 3010 Query 16915 AGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATC 16974 | || || |||| ||||| | || |||| || |||||||| || ||||| || Sbjct 3011 CGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACATCAGGCAGGCGAAGTC 3070 Query 16975 GCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTT 17034 ||| || | || ||||| | || || ||||| || || || | || |||||| Sbjct 3071 GCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAG 3130 Query 17035 TCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094 || || ||||| | ||| || || | ||||| || ||||| ||||| ||||| Sbjct 3131 GCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGATACCTTCGAC 3190 Query 17095 GGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTG 17154 || || || || | | || || || | | || | ||| | ||||| || | Sbjct 3191 GGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCTGGAGATCCAGTTTAG 3250 Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA--ATTTC 17212 | |||| || || || | ||| | ||| || |||||| ||||| ||||| | | ||| Sbjct 3251 CGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGCATTAAACAGGAATTC 3310 Query 17213 TCT 17215 ||| Sbjct 3311 TCT 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517349133220920