Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq22281 104 2e-17
>seq22281
Length=11977
Score = 104 bits (114), Expect = 2e-17
Identities = 182/265 (69%), Gaps = 0/265 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || ||||| || || |||||| ||| ||| | ||| ||||| || |||||
Sbjct 3416 ATGTAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCATCGCAATCTGG 3475
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| || || || ||||||| || || || ||| | || |||||| | |||
Sbjct 3476 AACCCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTGGCTAAAGCGTTCCACCAGA 3535
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| |||||||||||||| ||| ||||| || || || | | || |||||| |
Sbjct 3536 TTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGGAAATGAAGTGA 3595
Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473
|||| |||| | || | ||||||||| | ||| ||||| | ||| || || ||
Sbjct 3596 CGTTCGCTCGGTTTCAGCGCATCCCAGTCCTTCATATCCTTGGACAGATCAACCTCCTCC 3655
Query 17474 GGGGTCCAAAAACTAGCCACTGCCT 17498
||||| || |||| | ||||
Sbjct 3656 ACCGTCCAGAACGAAGCCTCCGCCT 3680
Score = 98.7 bits (108), Expect = 1e-15
Identities = 278/423 (66%), Gaps = 8/423 (2%)
Strand=Plus/Plus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG-ACGT- 16855
||| || ||||| || || || || |||| | ||||||||||| || ||| | ||
Sbjct 2894 ATCAGCCACAAACTCGATGTACTGCGACATCAGATCGCAGTTCATGCC---AAGCATGTC 2950
Query 16856 -ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACT 16914
|| || || || | |||||| || ||||| || |||||||| || ||||||
Sbjct 2951 AACGGGCAGTGCCTTCGTCAAGAACTCCTGCTCGATCACAACCGCATCGCGAATAATGTC 3010
Query 16915 AGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATC 16974
| || || |||| ||||| | || |||| || |||||||| || ||||| ||
Sbjct 3011 CGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACATCAGGCAGGCGAAGTC 3070
Query 16975 GCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTT 17034
||| || | || ||||| | || || ||||| || || || | || ||||||
Sbjct 3071 GCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAG 3130
Query 17035 TCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGAC 17094
|| || ||||| | ||| || || | ||||| || ||||| ||||| |||||
Sbjct 3131 GCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGATACCTTCGAC 3190
Query 17095 GGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTG 17154
|| || || || | | || || || | | || | ||| | ||||| || |
Sbjct 3191 GGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCTGGAGATCCAGTTTAG 3250
Query 17155 CACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA--ATTTC 17212
| |||| || || || | ||| | ||| || |||||| ||||| ||||| | | |||
Sbjct 3251 CGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGCATTAAACAGGAATTC 3310
Query 17213 TCT 17215
|||
Sbjct 3311 TCT 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517349133220920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |