Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq14204 96.9 4e-15 >seq14204 Length=1823 Score = 96.9 bits (106), Expect = 4e-15 Identities = 183/262 (70%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994 |||||||| || ||||||||||| | |||||||||||| | ||| ||||| | || Sbjct 162 TTCATGTACCGAATCTTTCCAAAGATTTCACGCTCCTTCCAACC-CTGATCGTGAATGCC 220 Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACT 119053 || | | ||| | || || ||||| ||||| ||||| || || | ||| ||| Sbjct 221 GGCGATCGACCACATGCAACCGACGTACCCGTTCGGATCGCGCCCATCCAGACT-GTAGC 279 Query 119054 TATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCATTCCAG 119111 |||||| | ||||| | | | | || ||| || || | || |||| ||||| Sbjct 280 GATCGTTCAGATAGATG--GCTGTCTCAAGCGCTTCCTCGGGCGATTTCGTCCACTCCAG 337 Query 119112 TAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTG 119171 || ||||| ||||||||||| || | | |||||||| || ||||| || | |||||| Sbjct 338 GATCTTTTTGGCCCAGTACATCCGCAGGAAGCCGTGCATCTTGCCCTCCTTCACCATCTG 397 Query 119172 AAGTTGTGCGGTGTTCCATAGA 119193 || || || | |||||| ||| Sbjct 398 CAGCTGGGCTGAGTTCCACAGA 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511220260701080