Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1284 105 5e-18 >seq1284 Length=4647 Score = 105 bits (116), Expect = 5e-18 Identities = 223/330 (68%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 |||||||| || |||||| || | | || || |||||||||||||| ||||| || Sbjct 3543 GTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAACTAGCAATGTTAAAAGGCACGCCC 3484 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | || | ||| ||||| | |||||||| || || ||||||| |||||||| ||| || Sbjct 3483 AGACCTACATCGGCTGAACGTTGATACATCTGGCACGAAAGCTCTCCATCACCAACAAAA 3424 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932 || || || || || || || | |||| || ||||| || ||| |||||| Sbjct 3423 AACTGTGCCAAGCAGTGGCATGGTGGTAGGGCCATGTTCGGAATATCAGAAGGATTCCAG 3364 Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTT 101992 || | ||| | || | | ||| ||| || | ||||| |||| |||| | Sbjct 3363 GCGCTCATGATGATTCGACGATCGAAAGGATTATTCTTTATTTTATCGATCACTTCAGCC 3304 Query 101993 AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACA-CCTTTATATTCTGCTCCGAA 102051 || || || | |||| ||| ||||||| | ||| ||| ||| | || || || Sbjct 3303 AACTGATCTATGCCTTGTCCCGCATAATCG-TCGTGACATGTTTTGTATGCGGCACCAAA 3245 Query 102052 ATGCCTCCACTGAAATCCATACACAGGTCC 102081 || | ||||||||| || |||||||| || Sbjct 3244 GTGACGCCACTGAAAGCCGTACACAGGGCC 3215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361117492915619