Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 381 7e-101
seq22281 100 3e-16
>seq25975
Length=7706
Score = 381 bits (422), Expect = 7e-101
Identities = 1206/1852 (65%), Gaps = 34/1852 (2%)
Strand=Plus/Minus
Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888
|| || || || || | ||| ||||| || ||||| | ||| | |||| ||||| |||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948
|| || || || || || | || || || | || ||||| | |||||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008
|||||||| || || || | || || |||||||| ||| ||| || || || |||
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCC 3498
Query 53009 CAAATAGTTTTATAAAC-TCGCTTAATATCTT-CTGGAAGGTTTGTAT--TCTGAATAGA 53064
|| | ||||| |||| |||| ||| |||| | ||| || | || | ||||| ||
Sbjct 3497 CATACCGTTTTGTAAAGATCGCG-AATTTCTTGCGGGATAGTCTCAATCTTTTGAATTGA 3439
Query 53065 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124
|||| | || |||| ||||| || || || ||||||| | | ||| |
Sbjct 3438 TCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAG 3379
Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184
| | |||||||| | || || || ||||| || || || | || | | | ||||
Sbjct 3378 ATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTA 3319
Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244
| || || || || || | || ||||| || || | |||||| || || || ||
Sbjct 3318 TACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGC 3259
Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304
|||||||| || |||| || | ||| | | ||||| | ||||| || ||
Sbjct 3258 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTT 3199
Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364
| ||| ||||| || || | ||| | || || ||
Sbjct 3198 CAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGAT 3139
Query 53365 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 53423
|| ||||| | | || | ||| | || || ||||| ||||| || | || | |
Sbjct 3138 GCCCTTACTCACCGGACTACCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACT 3080
Query 53424 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 53483
|||| || || || | ||| ||| |||| ||||||||||| || | | || || | ||
Sbjct 3079 CACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTT 3020
Query 53484 GTGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCTGCTAATCCTT 53540
| || ||| ||| || | ||||| |||||| | ||||| || || | ||| |
Sbjct 3019 GAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGA---TGAACGCATCGGCCATTCCCT 2963
Query 53541 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGAT 53600
||||||| |||||||| |||| || | | | || ||| | ||| || || | |||||
Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903
Query 53601 AATAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATTACTTTGACCACATCCT 53657
| || || | ||| || || || || || || | | || || ||| | | || ||||
Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTAT--CTTAG-CGACTTCCT 2846
Query 53658 TCAGTTTGAGAAAATCAAATTGTCCATCTA---TTACAAACATGTTCAATGCAATAGATG 53714
|||| ||| ||||||| | | |||| |||||||||||||||| ||||| || |
Sbjct 2845 TCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGG 2786
Query 53715 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAG 53772
||||||| || || ||||| || | | || || ||| | | || || ||||| ||
Sbjct 2785 CCAGATTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAG 2728
Query 53773 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 53832
|| ||| || |||||||| | ||| || |||||||| || || || ||||||||
Sbjct 2727 GTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTT 2668
Query 53833 ATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGAC 53892
|| || ||| |||| || ||||| | ||| || || || ||||| ||| | | |
Sbjct 2667 GTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTC 2608
Query 53893 ACGAGCCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTT 53951
| || || | | | || | | | ||| | ||||| || |||| |
Sbjct 2607 CTGTGCTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCT 2549
Query 53952 CAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 54011
| ||||| || ||||| || ||| || ||||| || | |||||||||| ||
Sbjct 2548 CGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCC 2489
Query 54012 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071
|| | | | ||| ||| || ||||| || ||||| || ||||| ||||| || |
Sbjct 2488 ACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACA 2429
Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131
|| | || | || || || || || || || || |||||||| ||| | | |
Sbjct 2428 TGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATA 2369
Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191
|||| |||||||||||||| || |||| | ||||||||| |||||| || ||||
Sbjct 2368 CATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCT 2309
Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251
|||| | ||| | || || || || || || | || ||| || | | || || ||
Sbjct 2308 GATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAA 2249
Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACC 54309
||| || || |||||||| || |||| | || || || | | | || | | ||
Sbjct 2248 TACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GCCC 2191
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369
|| || || ||| || || || | || ||| | || | ||||| || || |||||
Sbjct 2190 AATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTC 2131
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429
|| |||||||| |||| | || ||||||||| ||| | || | || || |
Sbjct 2130 AATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGC 2071
Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489
||| ||| | ||| || || ||||| ||||| | |||||| || ||||| |||||
Sbjct 2070 CGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGT 2011
Query 54490 CTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548
||||| |||| || || | || | || || || | ||||| ||||| | ||| |
Sbjct 2010 TTCGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATAT 1952
Query 54549 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTT 54608
|||| |||| ||||| || || ||||| || |||||||| ||| |||||| ||||
Sbjct 1951 GCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTT 1892
Query 54609 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|||| || ||||||||||| |||||| || ||||||||||| | |||||
Sbjct 1891 TAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAATTGCCGAGTT 1840
>seq22281
Length=11977
Score = 100 bits (110), Expect = 3e-16
Identities = 179/259 (69%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 24123 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 24182
|| ||||||| || ||||| |||||||| || || ||||| | ||| | |||||
Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107
Query 24183 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 24242
|| || |||||||| ||||| ||||||||||| || ||||| || ||||| || ||
Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167
Query 24243 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG 24302
|| ||||| || ||||| || || || || || | | | || || | ||
Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGC- 3226
Query 24303 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 24357
|| || || ||||| ||| | ||||| || |||||||| || || || |||| |
Sbjct 3227 CT-TCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 3285
Query 24358 TCTCTATAGCATTAAAGAG 24376
| || || |||||||| ||
Sbjct 3286 TTTCGATGGCATTAAACAG 3304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593496215859120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |