Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq22281 260 1e-64 seq24704 123 3e-23 seq734 116 4e-21 seq9735 113 5e-20 seq3879 104 2e-17 >seq22281 Length=11977 Score = 260 bits (288), Expect = 1e-64 Identities = 315/429 (73%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| || |||||||| ||| |||||||||| || ||||||| || |||||||| || Sbjct 3303 TGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAACT 3244 Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065 ||||| || ||| |||| |||||| ||||| | ||||| ||||| |||||||| | Sbjct 3243 GGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAAG 3184 Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125 | ||||||| ||||| ||||| |||| || ||||||||||| || ||||| |||| Sbjct 3183 GTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATGC 3124 Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185 | || || || ||| |||||||| || || | ||||| || ||||| |||||||| | Sbjct 3123 CGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTTCG 3064 Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245 |||| || |||||||| || |||||||| ||| || |||||| | ||| || Sbjct 3063 CCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGACATTA 3004 Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGC 117305 | ||| ||||| | ||||||||| ||| | || | || ||||| || ||| Sbjct 3003 TTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGTTGACATGC 2944 Query 117306 TGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGC 117365 | || | || ||||| ||||||||| ||||||||||| || || || | |||||| Sbjct 2943 TTGGCATGAACTGCGATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGTTTGCTGC 2884 Query 117366 TCGAGCTGG 117374 ||||||||| Sbjct 2883 TCGAGCTGG 2875 Score = 188 bits (208), Expect = 7e-43 Identities = 204/265 (77%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 |||| ||||| ||||||||||| || |||||||| || ||||||||||| | || |||| Sbjct 3680 AGGCGGAGGCTTCGTTCTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACT 3621 Query 116715 GGGA-GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773 |||| ||||| ||| | ||| || || ||||| |||||||| ||||| || ||| Sbjct 3620 GGGATGCGCTGAAACCG-AGCGAACGTCACTTCATTTCCCACGTGCTTGCCTTCTTTGCC 3562 Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTTCGCTCAGGAGGTGCAGGT 116832 || ||| |||||||| |||||||||||||| || || ||| || |||||||| ||||| Sbjct 3561 GCTTCCGATGGCATCGTGAACGAGAATCTGGTGGAACGCTTTAGC-CAGGAGGTACAGGT 3503 Query 116833 GGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAAT 116892 | || || || || |||||||| || ||||| || ||||| ||||||||| || || Sbjct 3502 AACGGAAGCACGCTGTTTCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGCGAGAT 3443 Query 116893 GTATTCGACCCTCATCGACACGTAC 116917 ||| || || |||||||| ||| Sbjct 3442 GTACTCACTGCTGATCGACACTTAC 3418 >seq24704 Length=53625 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| |||||||| || ||||| ||| | || ||||| || Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | |||| || || | ||||| ||||| ||||| |||| Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGAT 37593 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| || || |||||||| || | ||||| || ||||||| Sbjct 37594 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTAC 37653 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| ||| | || || ||||| ||| Sbjct 37654 AACATCCAGAAAGAGTCTACCCTTCATCTGGTG 37686 >seq734 Length=4884 Score = 116 bits (128), Expect = 4e-21 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || ||||| || || || || ||||||||| |||| || || || Sbjct 241 AAATATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGA-GC 183 Query 40746 CA-CCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803 || |||| | | || || | |||||| || |||| || || ||||| ||||| | Sbjct 182 CATCCGATACGATTGAGAATG-TCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCA 124 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 || ||||| || || |||| || || || |||||||| || | |||||||| ||| Sbjct 123 GATCAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGAC 64 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || |||||||||||||| |||| || ||||| || Sbjct 63 TATAACATCCAGAAGGAATCCACCCTCCATCTGGT 29 >seq9735 Length=15595 Score = 113 bits (124), Expect = 5e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| || ||||| ||||||||||| ||||| |||||||| | || ||||| Sbjct 4605 GAAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGC 4664 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | |||| | | | | |||| || || | || || || ||||| || | | Sbjct 4665 CTTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAG 4724 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || || |||| || ||||| |||||||| || | ||||| ||| ||||| Sbjct 4725 ATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACT 4784 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| || |||||||| | || || ||||| || |||| Sbjct 4785 ACAATATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCG 4824 >seq3879 Length=3897 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| |||||||| || ||||| |||||||| | || ||||| |||| | Sbjct 3691 ATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGA-GCCATC 3749 Query 40750 G-ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 | ||| | | |||| | |||| || || | ||||| |||||||| || | || | Sbjct 3750 GGACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATC 3808 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || | |||| ||| || || |||||||| || | || || | ||| |||| Sbjct 3809 AGCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACA 3868 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||||| | || |||| Sbjct 3869 ACATCCAGAAGGAGTCGACCTTGCA 3893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515023616351440