Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1284 118 7e-22 >seq1284 Length=4647 Score = 118 bits (130), Expect = 7e-22 Identities = 232/341 (68%), Gaps = 4/341 (1%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||||||| |||||||| || | | || || |||||||||||||||||||| || Sbjct 3543 GTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAACTAGCAATGTTAAAAGGCACGCCC 3484 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || || | ||| ||||| | |||||| | ||| || ||||||| |||||||| ||| || Sbjct 3483 AGACCTACATCGGCTGAACGTTGATACATCTGGCACGAAAGCTCTCCATCACCAACAAAA 3424 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| ||| || || || || | ||||| || |||| ||| | |||||| Sbjct 3423 AACTGTGCCAAGCAGTGGCATGGTGGTAGGGCCATGTTCGGAATATCAGAAGGATTCCAG 3364 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA--TCTGCT 97354 || | ||| | |||| | |||| || || | | ||| ||| || | || || Sbjct 3363 GCGCTCATGATGATTCGACGATCGAAAGGATTATTCTTTATTTTATCGATCACTTCAGC- 3305 Query 97355 TTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAA 97414 || ||||| | ||||| ||| |||||| || | | || ||| | || |||| Sbjct 3304 -CAACTGATCTATGCCTTGTCCCGCATAATCGTCGTGACATGTTTTGTATGCGGCACCAA 3246 Query 97415 AATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 | || | ||| || || || || ||||| || | ||| ||| Sbjct 3245 AGTGACGCCACTGAAAGCCGTACACAGGGCCCAAGTCACCT 3205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346655647547330