Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq14204 109 1e-18 >seq14204 Length=1823 Score = 109 bits (120), Expect = 1e-18 Identities = 214/313 (68%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 189420 AACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGA 189479 |||| |||| || |||| ||||| ||| |||||| | | || |||||||||||| Sbjct 447 AACTGGAAACGGCCAAAACGCATGACGATCTGTGGAACTCAGCCCAGCTGCAGATGGTGA 388 Query 189480 GAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGA 189539 || || || ||||| | || | || ||||| ||||| || ||||| || || |||| Sbjct 387 AGGAGGGCAAGATGCACGGCTTCCTGCGGATGTACTGGGCCAAAAAGATCCTGGAGTGGA 328 Query 189540 CTAGAACACCTGAAGACGC-TTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACT 189597 | | | | || || || || ||||| | || |||||| ||||| | ||| || Sbjct 327 CGAAATCGCCCGAGGAAGCGCTTGAG--ACAGCCATCTATCTGAACGATCGCTACAGTCT 270 Query 189598 AGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGA 189657 || || ||||| ||||| ||||| ||||| |||||||| || ||| | ||||| Sbjct 269 GGATGGGCGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGA 210 Query 189658 TAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAATTATGAGAGTTC 189717 | | ||||| || | || ||||||||||| | || ||||| ||||| | | Sbjct 209 TCAGGGTTGGAAGGAGCGTGAAATCTTTGGAAAGATTCGGTACATGAACTATGACGGATG 150 Query 189718 TAAGAAGAAATTT 189730 |||| |||||| Sbjct 149 TAAGCGTAAATTT 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922846342954760