Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq14813 102 9e-17 seq28749 100 3e-16 seq27305 100 3e-16 seq25207 100 3e-16 seq24018 100 3e-16 seq11114 100 3e-16 seq3879 100 3e-16 seq25255 98.7 1e-15 seq11054 98.7 1e-15 seq26056 96.9 4e-15 seq15369 96.9 4e-15 seq22949 95.1 1e-14 seq9735 82.4 9e-11 >seq14813 Length=1774 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| ||||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 869 AAAAATCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 928 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 929 TGACCACTATACTATCGAGGA 949 >seq28749 Length=22875 Score = 100 bits (110), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||| |||| |||| || | ||||||||||||| ||||||||||||||||||||| || Sbjct 15998 AAAACTTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 16057 Query 60115 ACTCACCACTATACTACCGAGGAT 60138 ||| |||||||||||| ||||||| Sbjct 16058 ACTTACCACTATACTATCGAGGAT 16081 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 16293 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 16234 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 16233 TACTATCGAGGAT 16221 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 15600 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 15659 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 15660 TACTATCGAGGA 15671 >seq27305 Length=27287 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 || ||||||| ||| || | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 10586 AAGAATTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 10645 Query 60116 CTCACCACTATACTACCGAGGA 60137 || |||||||||||| |||||| Sbjct 10646 CTGACCACTATACTATCGAGGA 10667 >seq25207 Length=8452 Score = 100 bits (110), Expect = 3e-16 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 || ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 1820 TTATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 1879 Query 60122 ACTATACTACCGAGGATTGAATATA 60146 ||||||||| |||||| | ||||| Sbjct 1880 ACTATACTATCGAGGAATTCATATA 1904 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 596 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 655 Query 60122 ACTATACTACCGAGGAT 60138 ||||||||| ||||||| Sbjct 656 ACTATACTATCGAGGAT 672 >seq24018 Length=9709 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 ||||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 6806 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 6865 Query 60123 CTATACTACCGAGGA 60137 |||||||| |||||| Sbjct 6866 CTATACTATCGAGGA 6880 >seq11114 Length=38139 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||| ||||| ||| || | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 25087 AAAAGTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 25028 Query 60116 CTCACCACTATACTACCGAGGA 60137 || |||||||||||| |||||| Sbjct 25027 CTGACCACTATACTATCGAGGA 25006 >seq3879 Length=3897 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 42977 CAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAG 43036 ||| ||||| || |||||| || || |||||||| | || ||| || | || || || Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838 Query 43037 CTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGAT 43096 ||||||||| ||||| || | |||||||| || | || | || |||||||||| ||| Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778 Query 43097 TTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCGACCGTGATGGTTTT 43153 || || | || | | |||||| |||| || || || | |||||||| || Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTC---CGATGGCTCGACCTCCAAAGTGATGGTCTT 3721 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || ||||| || || ||||| ||||| Sbjct 3720 GCCAGTCAGCGTTTTCACGAAGATCTGCAT 3691 >seq25255 Length=8333 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 |||| | |||| || | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 3728 AAATCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 3787 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 3788 ACCACTATACTATCGAGGA 3806 >seq11054 Length=2348 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 60054 ATGAAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111 || ||||| || ||||| || | ||||||||||||| ||||||||||||||||||||| Sbjct 1474 ATAAAAAACTTCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 1415 Query 60112 CATACTCACCACTATACTACCGAGGA 60137 ||||| |||||||||||| |||||| Sbjct 1414 GATACTGACCACTATACTATCGAGGA 1389 >seq26056 Length=7591 Score = 96.9 bits (106), Expect = 4e-15 Identities = 72/84 (86%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 ||||| |||||||| | | ||||||||||||| ||||||||||||||||||||| | Sbjct 2475 AAAAACATTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 2534 Query 60114 TACTCACCACTATACTACCGAGGA 60137 |||| |||||||||||| |||||| Sbjct 2535 TACTGACCACTATACTATCGAGGA 2558 >seq15369 Length=13753 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 12271 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12330 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 12331 TACTATCGAGGAT 12343 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 13374 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 13433 Query 60126 TACTACCGAGGAT 60138 ||||| ||||||| Sbjct 13434 TACTATCGAGGAT 13446 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 12691 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12750 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 12751 TACTATCGAGGA 12762 >seq22949 Length=11356 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 8639 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 8580 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 8579 TACTATCGAGGA 8568 >seq9735 Length=15595 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||||||||| || | ||||| || | || || |||||||| || || || Sbjct 4800 TCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAG 4741 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || |||||||| || | || | || ||||| ||| ||| || || | || Sbjct 4740 ATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTC 4681 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| | || || || | |||||||| ||||| || ||||| || || Sbjct 4680 TCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACG 4621 Query 43173 AAGATTTGCATTTTT 43187 || || ||||| ||| Sbjct 4620 AAAATCTGCATGTTT 4606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571600530891320