Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq14813 102 9e-17
seq28749 100 3e-16
seq27305 100 3e-16
seq25207 100 3e-16
seq24018 100 3e-16
seq11114 100 3e-16
seq3879 100 3e-16
seq25255 98.7 1e-15
seq11054 98.7 1e-15
seq26056 96.9 4e-15
seq15369 96.9 4e-15
seq22949 95.1 1e-14
seq9735 82.4 9e-11
>seq14813
Length=1774
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| ||||| || | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 869 AAAAATCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 928
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||| ||||||
Sbjct 929 TGACCACTATACTATCGAGGA 949
>seq28749
Length=22875
Score = 100 bits (110), Expect = 3e-16
Identities = 73/84 (87%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
|||| |||| |||| || | ||||||||||||| ||||||||||||||||||||| ||
Sbjct 15998 AAAACTTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 16057
Query 60115 ACTCACCACTATACTACCGAGGAT 60138
||| |||||||||||| |||||||
Sbjct 16058 ACTTACCACTATACTATCGAGGAT 16081
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 16293 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 16234
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 16233 TACTATCGAGGAT 16221
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 15600 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 15659
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 15660 TACTATCGAGGA 15671
>seq27305
Length=27287
Score = 100 bits (110), Expect = 3e-16
Identities = 72/82 (88%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|| ||||||| ||| || | ||||||||||||| ||||||||||||||||||||| |||
Sbjct 10586 AAGAATTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 10645
Query 60116 CTCACCACTATACTACCGAGGA 60137
|| |||||||||||| ||||||
Sbjct 10646 CTGACCACTATACTATCGAGGA 10667
>seq25207
Length=8452
Score = 100 bits (110), Expect = 3e-16
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
|| ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 1820 TTATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 1879
Query 60122 ACTATACTACCGAGGATTGAATATA 60146
||||||||| |||||| | |||||
Sbjct 1880 ACTATACTATCGAGGAATTCATATA 1904
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 596 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 655
Query 60122 ACTATACTACCGAGGAT 60138
||||||||| |||||||
Sbjct 656 ACTATACTATCGAGGAT 672
>seq24018
Length=9709
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 6806 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 6865
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 6866 CTATACTATCGAGGA 6880
>seq11114
Length=38139
Score = 100 bits (110), Expect = 3e-16
Identities = 72/82 (88%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||| ||||| ||| || | ||||||||||||| ||||||||||||||||||||| |||
Sbjct 25087 AAAAGTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 25028
Query 60116 CTCACCACTATACTACCGAGGA 60137
|| |||||||||||| ||||||
Sbjct 25027 CTGACCACTATACTATCGAGGA 25006
>seq3879
Length=3897
Score = 100 bits (110), Expect = 3e-16
Identities = 149/210 (71%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 42977 CAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAG 43036
||| ||||| || |||||| || || |||||||| | || ||| || | || || ||
Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838
Query 43037 CTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGAT 43096
||||||||| ||||| || | |||||||| || | || | || |||||||||| |||
Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778
Query 43097 TTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCGACCGTGATGGTTTT 43153
|| || | || | | |||||| |||| || || || | |||||||| ||
Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTC---CGATGGCTCGACCTCCAAAGTGATGGTCTT 3721
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || ||||| || || ||||| |||||
Sbjct 3720 GCCAGTCAGCGTTTTCACGAAGATCTGCAT 3691
>seq25255
Length=8333
Score = 98.7 bits (108), Expect = 1e-15
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118
|||| | |||| || | ||||||||||||| ||||||||||||||||||||| |||||
Sbjct 3728 AAATCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 3787
Query 60119 ACCACTATACTACCGAGGA 60137
|||||||||||| ||||||
Sbjct 3788 ACCACTATACTATCGAGGA 3806
>seq11054
Length=2348
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 60054 ATGAAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111
|| ||||| || ||||| || | ||||||||||||| |||||||||||||||||||||
Sbjct 1474 ATAAAAAACTTCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 1415
Query 60112 CATACTCACCACTATACTACCGAGGA 60137
||||| |||||||||||| ||||||
Sbjct 1414 GATACTGACCACTATACTATCGAGGA 1389
>seq26056
Length=7591
Score = 96.9 bits (106), Expect = 4e-15
Identities = 72/84 (86%), Gaps = 3/84 (4%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
||||| |||||||| | | ||||||||||||| ||||||||||||||||||||| |
Sbjct 2475 AAAAACATTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 2534
Query 60114 TACTCACCACTATACTACCGAGGA 60137
|||| |||||||||||| ||||||
Sbjct 2535 TACTGACCACTATACTATCGAGGA 2558
>seq15369
Length=13753
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 12271 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12330
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 12331 TACTATCGAGGAT 12343
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 13374 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 13433
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 13434 TACTATCGAGGAT 13446
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 12691 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12750
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 12751 TACTATCGAGGA 12762
>seq22949
Length=11356
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 8639 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 8580
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 8579 TACTATCGAGGA 8568
>seq9735
Length=15595
Score = 82.4 bits (90), Expect = 9e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| ||||||||||| || | ||||| || | || || |||||||| || || ||
Sbjct 4800 TCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAG 4741
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || |||||||| || | || | || ||||| ||| ||| || || | ||
Sbjct 4740 ATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTC 4681
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||| | || || || | |||||||| ||||| || ||||| || ||
Sbjct 4680 TCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACG 4621
Query 43173 AAGATTTGCATTTTT 43187
|| || ||||| |||
Sbjct 4620 AAAATCTGCATGTTT 4606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571600530891320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |