Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1284 96.9 3e-15 >seq1284 Length=4647 Score = 96.9 bits (106), Expect = 3e-15 Identities = 231/343 (67%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| |||||||| || ||||| ||| | || ||||| || | ||| || Sbjct 3206 GGTGACTTGGGCCCTGTGTACGGCTTTCAGTGGCGTCACTTTGGTGCCGCATACAAA-AC 3264 Query 20278 ATGAACACAA--ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAA 20335 ||| ||| | ||||| |||||||| ||||||| || | || || || || Sbjct 3265 ATGT-CACGACGATTATGCGGGACAAGGCATAGATCAGTTGGCTGAAGTGATCGATAAAA 3323 Query 20336 TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGC 20395 | || | || || ||| | |||| || | |||||||||| || ||| | | Sbjct 3324 TAAAGAATAATCCTTTCGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCTGATATTC 3383 Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAA 20454 | ||||| | || ||||| || |||| || || |||| |||| | || || Sbjct 3384 CGAACATGGCCCTACCACCATGCCAC-TGCTTGGCACAGTTTTTTGTTGGTGATGGAGAG 3442 Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514 | ||||| || ||||||||||| || || ||| | || ||||| || ||||| || ||| Sbjct 3443 CTTTCGTGCCAGATGTATCAACGTTCAGCCGATGTAGGTCTGGGCGTGCCTTTTAACATT 3502 Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 || ||||| | |||| || | ||||| || ||||| |||| Sbjct 3503 GCTAGTTACTCCTTGCTGACCCACATGATCGCGCATGTCACAG 3545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399036253144705