Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3879 104 2e-17
seq9735 89.7 4e-13
>seq3879
Length=3897
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45130 CAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAG 45189
|||||||| || ||||||||| |||||||| ||| || || | || |||||
Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838
Query 45190 TTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAAT 45249
|| || |||||||| ||||| ||||| || || ||||| | |||||||||||| ||
Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778
Query 45250 TTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCC 45309
|| ||| || | | | ||||| ||| ||||||| || || ||||||||
Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCC 3718
Query 45310 CGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || ||||| ||||| |||||
Sbjct 3717 AGTCAGCGTTTTCACGAAGATCTGCAT 3691
>seq9735
Length=15595
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||| ||||||||| || |||| | || ||||| || || ||||| ||
Sbjct 4800 TCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAG 4741
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|||| ||||| || || ||||| | || ||||| ||| || || ||| || |
Sbjct 4740 ATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTC 4681
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | ||||| | ||| ||||| | || || |||||||| || || || |||||
Sbjct 4680 TCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACG 4621
Query 45326 AAGATTTGCATGTT 45339
|| || ||||||||
Sbjct 4620 AAAATCTGCATGTT 4607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394928973902749
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |