Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3879 104 2e-17 seq9735 89.7 4e-13 >seq3879 Length=3897 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45130 CAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAG 45189 |||||||| || ||||||||| |||||||| ||| || || | || ||||| Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838 Query 45190 TTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAAT 45249 || || |||||||| ||||| ||||| || || ||||| | |||||||||||| || Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778 Query 45250 TTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCC 45309 || ||| || | | | ||||| ||| ||||||| || || |||||||| Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCC 3718 Query 45310 CGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || ||||| ||||| ||||| Sbjct 3717 AGTCAGCGTTTTCACGAAGATCTGCAT 3691 >seq9735 Length=15595 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||| ||||||||| || |||| | || ||||| || || ||||| || Sbjct 4800 TCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAG 4741 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| || || ||||| | || ||||| ||| || || ||| || | Sbjct 4740 ATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTC 4681 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | ||||| | ||| ||||| | || || |||||||| || || || ||||| Sbjct 4680 TCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACG 4621 Query 45326 AAGATTTGCATGTT 45339 || || |||||||| Sbjct 4620 AAAATCTGCATGTT 4607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394928973902749