Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq25975 866 0.0 seq22281 168 6e-37 seq9735 113 4e-20 seq734 111 1e-19 seq24704 96.9 3e-15 seq29242 95.1 1e-14 >seq25975 Length=7706 Score = 866 bits (960), Expect = 0.0 Identities = 1370/1952 (70%), Gaps = 39/1952 (2%) Strand=Plus/Minus Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 || |||||||| |||||||| || || ||| ||||||| |||||||| | |||||||||| Sbjct 3710 GTTTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATG 3651 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || || |||| |||||| |||||| |||| ||||| |||||||||| || || || | Sbjct 3650 CCAGTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTG 3591 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || | | || | ||||||||| || ||||||||||||||| || ||||| || Sbjct 3590 GGTTCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCT 3531 Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 ||||| || || | || || || || |||||||| || ||||| || | | || Sbjct 3530 GCCATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATT 3471 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 ||| ||| || | || ||| | || | || || || || | ||| || || Sbjct 3470 TCTTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTC 3411 Query 22403 ATCGTATCG---TTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 || |||| | ||| || || ||| ||||| ||| | | ||||| |||| ||| Sbjct 3410 AT---ATCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACC 3354 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || |||||||| || || | ||||| | | ||| | ||| || ||| | || ||||| Sbjct 3353 ACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAAC 3294 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 ||||||||||| || || || || || |||||||| ||||||||||| |||||||| ||| Sbjct 3293 GATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGC 3234 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 || || | | |||||||| | ||||| ||| | | |||||||| |||||| || Sbjct 3233 GAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGCTCA 3174 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 | ||| | | |||| |||||| ||||| |||| | ||| |||| |||| || || Sbjct 3173 GTCGG---CTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCC 3117 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 ||||||||||||||||| |||| ||||| | || ||||| || |||| || ||| Sbjct 3116 TCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCG 3057 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGC 22819 |||| || || ||||| |||| | ||||| | || | ||||||||||||| Sbjct 3056 AAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG- 2998 Query 22820 ATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTT 22878 ||| ||||| | | |||||| || ||||| |||||||| ||||||||||| ||||||| Sbjct 2997 ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTG 2938 Query 22879 TTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTT 22938 || || || || ||||| || | |||||| | || ||| || | |||| Sbjct 2937 GCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTT 2878 Query 22939 CAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGA 22998 || || | || || || || | | ||| || | ||| | Sbjct 2877 CAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATC--ATACGTTTTA 2820 Query 22999 --TTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 ||| |||||| |||| | || |||||||| |||||||| || || || ||||| Sbjct 2819 TCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCC 2760 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 || |||| ||||| ||||||||||| || || ||| ||| || || || || | ||| Sbjct 2759 TTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTC 2700 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 ||| || ||||| |||||||| | ||||||||| |||||||| || |||||| || Sbjct 2699 TGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCC 2640 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGT-CTGAGCGTGAACACGTCGCACGTACCT 23235 |||||||||||||||||||| ||||| ||| ||| || | || |||| | | | Sbjct 2639 ACCTGCGACTCGATGATCGCGAACCACA-AGTCCTGTGCTTTGACCTGTCGAATAAAGCG 2581 Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295 || |||| ||||||| ||||| | || || || |||| | || ||||| Sbjct 2580 ACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAG 2521 Query 23296 GCCGGG-CGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGCGTC 23351 ||||| | || | | |||||||| || ||||||||| ||||| || || || Sbjct 2520 ACCGGGACAATCGTGT-GGACACATCAGGCTCCACATT---TCATTCGCCTCCACACGCT 2465 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || |||||||||||||| ||||||||||||| |||||||| || ||||| || | Sbjct 2464 TCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCT 2405 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 |||| ||||| || || | ||| | ||| || || || || |||||||||| || || | Sbjct 2404 TGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGAT 2345 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | ||| || || || || || || |||||||||||||| ||||| || ||||| |||| Sbjct 2344 AGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGT 2285 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 ||||||| | ||||||||||| | ||||| || ||| | ||| | | | Sbjct 2284 TGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATG 2225 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 || || || || | | ||| |||| | || ||||| ||| |||| || || |||| Sbjct 2224 TTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCA 2165 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC---TTTGGTCGCGA 23708 ||| ||||| |||||||| ||||| || ||||| ||||| || || ||||| | Sbjct 2164 GCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTC---A 2108 Query 23709 CCAAGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGG 23764 || ||||| ||||| | || |||| ||||||| || | |||| ||||| Sbjct 2107 GCAGAAAACAGGAAGAGAGCTGAGGCCGCT----GCGTAGCCGCTGCAAACATGGTCGGT 2052 Query 23765 CTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824 |||||| |||||||| | | |||| ||||| ||||| ||||| || ||||| ||| Sbjct 2051 GAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGATCGCTGCATCGATG 1992 Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTG 23884 | || ||||| || ||||| ||||||||||||| ||| | || |||| ||| || | Sbjct 1991 TTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGCTCAACAATT 1932 Query 23885 ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAG 23944 || || || |||| || ||||| |||| || |||||||| || ||||||| || Sbjct 1931 TTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAGCCGAAATAGTTGTAC 1872 Query 23945 TTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATG 24004 |||||| ||||||| | || ||||| ||||| |||| |||||| | || | Sbjct 1871 CCAAAGTCGCGATCGTAAATAATTGCCGAGTTCAAGCGGTCTGCATTGTCCATTATCACC 1812 Query 24005 TTGTAATGAAAATTCGATATCATCGGCGTTTT 24036 ||||||||||| | ||| ||||| || | ||| Sbjct 1811 TTGTAATGAAAGTCCGAAATCATAGGAGATTT 1780 >seq22281 Length=11977 Score = 168 bits (186), Expect = 6e-37 Identities = 297/430 (69%), Gaps = 2/430 (0%) Strand=Plus/Minus Query 57879 CTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAA 57937 ||||| || || |||||||| |||| ||| | |||||||| || ||| | | || Sbjct 3304 CTGTTTAATGCCATCGAAACGCTGCCGTGCG-TGAAGAAGAAGGCTGACTGGGCGCTAAA 3246 Query 57938 ATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997 ||||| ||| | ||| | |||| ||| | | | || |||||||||||||| Sbjct 3245 CTGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGA 3186 Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 |||||| ||||| |||||||| || | || || ||| | ||||| || |||||||| Sbjct 3185 AGGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGAT 3126 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTT 58117 ||| || || || || |||||| |||| ||||||||||| || || || || || Sbjct 3125 GCCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTT 3066 Query 58118 TGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACAT 58177 || ||||| |||| | | | || | || ||| || ||| ||| | |||||| Sbjct 3065 CGCCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGACAT 3006 Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 ||| ||| ||||| | |||||| | ||||| | || | || || || || | ||| Sbjct 3005 TATTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGTTGACAT 2946 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 ||| || |||||| ||| ||||||| ||||||| |||||||| || || | | | Sbjct 2945 GCTTGGCATGAACTGCGATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGTTTGCT 2886 Query 58298 GCTCGAACTG 58307 |||||| ||| Sbjct 2885 GCTCGAGCTG 2876 Score = 129 bits (142), Expect = 5e-25 Identities = 189/267 (71%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| || || ||||| ||||| || || || || || ||||| |||||| ||| || | Sbjct 3680 AGGCGGAGGCTTCGTTCTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACT 3621 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAA----ATTTTATTAAACACGTGTTGGCGTTTTTC 57704 ||||| | || ||| | ||| ||| | || ||| |||||| | || || || Sbjct 3620 GGGATGCGCTGAAA----CCGAGCGAACGTCACTTCATTTCCCACGTGCTTGCCTTCTTT 3565 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAA 57764 ||||| |||||||| || || ||||||||| |||| ||| | ||| || || || || Sbjct 3564 GCCGCTTCCGATGGCATCGTGAACGAGAATCTGGTGGAACGCTTTAGCCAGGAGGTACAG 3505 Query 57765 GTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAA 57824 || ||||| || | || || ||||| || || | || || ||||||||||| || Sbjct 3504 GTAACGGAAGCACGCTGTTTCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGCGAG 3445 Query 57825 ATGTATTCGCTACTCATCGATACGTAC 57851 ||||| || || || ||||| || ||| Sbjct 3444 ATGTACTCACTGCTGATCGACACTTAC 3418 >seq9735 Length=15595 Score = 113 bits (124), Expect = 4e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||||||||| |||||||| || || || || ||||| || ||||| | || || || || Sbjct 4606 AAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 4665 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | || || | || ||| ||||||||| | || || || Sbjct 4666 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGA 4725 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||||| || || || ||||| ||| |||| || | ||| | ||| || Sbjct 4726 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 4785 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || ||||| || |||||||| ||||||||||| || |||| Sbjct 4786 CAATATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCGACT 4827 >seq734 Length=4884 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 |||||| ||||| ||||| || || |||||||| || || || |||||| |||| ||||| Sbjct 244 ATCAAATATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGA 185 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 || ||||| | | || | ||||| | || ||| ||||| || | || || Sbjct 184 GCCATCCGATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACC 125 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || ||||||||||| || || || || || ||| ||||||| || || || Sbjct 124 AGATCAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGA 65 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || ||||| || || |||||||| ||| | ||| | || |||| Sbjct 64 CTATAACATCCAGAAGGAATCCACCCTCCATCTGGTCCTTCGTCTGCGTGGTGGTA 9 >seq24704 Length=53625 Score = 96.9 bits (106), Expect = 3e-15 Identities = 169/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || || || || || || || ||| | || || || || Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || || | |||| | || || || || ||||||||| || | ||||| || Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGAT 37593 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368 ||||||||||| || ||||| || || ||| |||| || | | | || || ||| || Sbjct 37594 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGA-TGGACGCACGCTGTCCGACTA 37652 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAA 31424 ||||| || ||||| || || ||||||||||| ||| | ||| | || ||| |||| Sbjct 37653 CAACATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGGTGCCAAGAA 37712 Query 31425 GCG 31427 ||| Sbjct 37713 GCG 37715 >seq29242 Length=5648 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || || ||||| || || || ||||| |||| ||||| || ||| Sbjct 5642 ATGCAGATTTTTGTGAAAACGCTGACCGGAAAGACCATCACTCTCGAGGTTGAGCCATCC 5583 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || ||| ||||| || | || || || ||| Sbjct 5582 GATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGATCAG 5523 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || ||| ||||||| || || || |||||| Sbjct 5522 CAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAAC 5463 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || ||||| || || |||||||| ||| | ||| | || || Sbjct 5462 ATTCAGAAGGAATCCACCCTCCATCTGGTTCTTCGTCTGCGCGGTGG 5416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445597181502480