Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 396 3e-105
seq22281 140 4e-28
>seq25975
Length=7706
Score = 396 bits (438), Expect = 3e-105
Identities = 1210/1852 (65%), Gaps = 34/1852 (2%)
Strand=Plus/Minus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126
|| || || || || | ||| ||||| || ||||| | ||| | |||| ||||| |||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186
|| || ||| || || || | || || || | || ||||| | |||||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246
|||||||| || || || | || || |||||||| ||| ||| || || || |||
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCC 3498
Query 62247 CAAATAGTTTTATAAAC-TCGCTTAATATCTT-CTGGAAGGTTTGTAT--TCTGAATGGA 62302
|| | ||||| |||| |||| ||| |||| | ||| || | || | ||||| ||
Sbjct 3497 CATACCGTTTTGTAAAGATCGCG-AATTTCTTGCGGGATAGTCTCAATCTTTTGAATTGA 3439
Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362
|||| | || |||| ||||| || || || ||||||| | | ||| |
Sbjct 3438 TCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAG 3379
Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422
| | |||||||| |||| || || || || || || || | || | | | ||||
Sbjct 3378 ATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTA 3319
Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482
| || || || || || | ||| ||||| || || | |||||| || || || ||
Sbjct 3318 TACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGC 3259
Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542
|||||||| || |||| || | ||| | | ||||| | ||||| || ||
Sbjct 3258 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTT 3199
Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAAT 62602
| | ||| ||||| || || | ||| | || || || ||
Sbjct 3198 CAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGAT 3139
Query 62603 ACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTT 62661
|| ||||| | | || | ||| | || || || || ||||| || | || | |
Sbjct 3138 GCCCTTACTCACCGGACTACCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACT 3080
Query 62662 TACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTT 62721
||| || || || | ||| ||| |||| |||||||| || || | | || || | ||
Sbjct 3079 CACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTT 3020
Query 62722 GTGCTTCCGGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCCGCTAATCCTT 62778
| || ||| ||| || | ||||| |||||| | ||||| || || | ||| |
Sbjct 3019 GAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGA---TGAACGCATCGGCCATTCCCT 2963
Query 62779 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGAT 62838
||||||| |||||||| |||| || | | | || ||| | ||| || || | |||||
Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903
Query 62839 AATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCT 62895
| || || | ||| || || || || ||||| | | || || ||| | | || ||||
Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTAT--CTTAG-CGACTTCCT 2846
Query 62896 TCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATG 62952
|||| ||| ||||||| | |||| |||||||||||||||| |||| || |
Sbjct 2845 TCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGG 2786
Query 62953 CCAGATTACACACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAG 63010
||||||| ||||| ||||| || | | || || ||| | | || || ||||| ||
Sbjct 2785 CCAGATTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAG 2728
Query 63011 ATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 63070
|| ||| || || ||||| | ||| || |||||||| || || || ||||||||
Sbjct 2727 GTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTT 2668
Query 63071 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 63130
|| || ||| |||| || ||||| | ||| || || || ||||| ||| | | |
Sbjct 2667 GTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTC 2608
Query 63131 TCGAGCCTTTAT-TATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTT 63189
| || || | | | || | | | | ||| | ||||| || |||| |
Sbjct 2607 CTGTGCTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCT 2549
Query 63190 CGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACC 63249
||||||| || ||||| || ||| | ||||| || | |||||||||| ||
Sbjct 2548 CGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCC 2489
Query 63250 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63309
|| | | | ||| ||| || ||||| || ||||| || ||||| ||||| || |
Sbjct 2488 ACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACA 2429
Query 63310 GATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63369
|| | | | || || || || || || || || |||||||| ||| | | |
Sbjct 2428 TGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATA 2369
Query 63370 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63429
|||| |||||||||||||| || ||||| | ||||||||| |||||| || ||||
Sbjct 2368 CATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCT 2309
Query 63430 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63489
|||| | ||| | || || || || || || | || ||| || | | |||||||| |
Sbjct 2308 GATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAA 2249
Query 63490 TACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACC 63547
|||| || || |||||||| || ||| | || || || | | | || | | ||
Sbjct 2248 TACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GCCC 2191
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607
|| || || ||| || || || | || ||| | || | || || || || || ||
Sbjct 2190 AATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTC 2131
Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCC 63667
||||||||||| |||| | || ||||||||| ||| | || | || || |
Sbjct 2130 AATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGC 2071
Query 63668 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63727
||| ||| | ||| || || ||||| ||||| | |||||| || ||||| |||||
Sbjct 2070 CGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGT 2011
Query 63728 CTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGT 63786
|| || |||| || || | || | || || || | ||||| ||||| | ||| |
Sbjct 2010 TTCGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATAT 1952
Query 63787 GCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63846
|||| |||| ||||||||||| ||||| || | |||||| ||| |||||| ||||
Sbjct 1951 GCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTT 1892
Query 63847 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
|||| || ||||||||||| |||||| || ||||||||||| |||| ||
Sbjct 1891 TAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAATTGCCGAGTT 1840
>seq22281
Length=11977
Score = 140 bits (154), Expect = 4e-28
Identities = 188/259 (73%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629
|| ||||||| || ||||| ||||||||||| || ||||| | ||| | |||||
Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107
Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689
|| || |||||||| ||||| ||||||||||| || ||||| || |||||||||||
Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167
Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749
||| |||||||| ||||| || || || || || | | | ||| || | ||
Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGC- 3226
Query 33750 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33804
|| || || ||||| ||| | ||||| || |||||||| || || || |||| ||
Sbjct 3227 CT-TCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 3285
Query 33805 TTTCTATGGCATTAAAGAG 33823
|||| ||||||||||| ||
Sbjct 3286 TTTCGATGGCATTAAACAG 3304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629578513366320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |