Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 136 4e-27
>seq25975
Length=7706
Score = 136 bits (150), Expect = 4e-27
Identities = 1139/1818 (63%), Gaps = 44/1818 (2%)
Strand=Plus/Minus
Query 36817 GCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAA 36876
|||| || || | || ||||||||| |||||||| | |||| | |||| ||||| |||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 36877 TGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATATTGTCATTGATTGAC 36934
|| || ||||| || |||| | || | | | | |||||| | |||||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTG--AACGATTGCG 3560
Query 36935 TTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT---TGAGATA 36991
||||| ||||||||||| | || |||||||||| | | || |||| ||||||
Sbjct 3559 ACTGATCGATAAACGCACCGCGATCCGCTGCCATTT-TGATGCACGTTTTCACTGAGAT- 3502
Query 36992 TCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAA-TCTAAATGTT--GAA 37048
|||||| |||||||| || | | || | | || | | ||| ||| || |||
Sbjct 3501 -CTCCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAA 3443
Query 37049 TAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTA 37108
| || ||||| | ||| ||| ||||| || || || ||| | || | ||
Sbjct 3442 TTGATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATA-ATCCCATGTTG 3384
Query 37109 TT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTT 37167
| || || || || || | ||||| |||||||| || || |||| || | |||
Sbjct 3383 GTCAGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTA 3324
Query 37168 GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTA 37227
| |||| || || || || || | || ||||| || | | ||||| | |||
Sbjct 3323 TTGTATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTC 3264
Query 37228 GATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTC 37287
|| || || ||||| || || | || || ||| | | || || | ||| |
Sbjct 3263 GAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTT 3204
Query 37288 TTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGT 37347
| || | || ||| | ||| | || || || | ||| |||||| || || ||
Sbjct 3203 TCCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGC 3144
Query 37348 AGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCT 37407
|| || || |||||| | ||| | | | || || || || ||||| | | ||
Sbjct 3143 AGGATGCCCTTACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCC 3084
Query 37408 AGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAAT 37467
| || || |||| ||| ||||| | |||| || |||||||| |||||| || |
Sbjct 3083 AACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGC 3024
Query 37468 ATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCC 37527
||| || || ||||| ||| | | ||||| || ||| || ||| |||| |||| |||
Sbjct 3023 TTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCC 2964
Query 37528 TGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATC---TAGACGATTCTATCACT 37584
|||||||| ||||| ||||||| || | | || || | ||| | || ||
Sbjct 2963 TGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCC---TCCGGGACA 2907
Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATT 37644
||||| || |||| ||| || || || || ||||| || ||| || | | |
Sbjct 2906 GGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCC 2847
Query 37645 CTCAACTTGTCGAACATAAATACGTTATTA------TTAACAAATTTACTCAACGAAATA 37698
||| |||| | | | ||||||| ||| || ||||| | |||| | |||
Sbjct 2846 TTCAGCTTG--GTAAAATCATACGTT-TTATCTTGCTTTACAAACATGTTCAAAGCAATC 2790
Query 37699 GATCCTAGATTACATACAGCAACTTCAT-CTTCGTTACTAA-ATTGTATAATCTCTGTAC 37756
|| | ||||| || || || ||||| | ||||| || || | | | ||| || || |
Sbjct 2789 GAGGCCAGATTGCACACCGCTACTTCGTCCTTCG--ACGAATACTCCACAATTTCGGTGC 2732
Query 37757 AGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAAT 37816
| || || || |||| ||||| | ||| ||||| ||| ||| || | ||
Sbjct 2731 ACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCAT 2672
Query 37817 CTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATA 37876
| || || || || || || || ||| | || | |||||| || | |||
Sbjct 2671 CCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCA-C 2613
Query 37877 AACTTCT-TGCTTT-AACGATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAA 37934
|| | || |||||| | | ||| ||| || | | ||||| | | || |
Sbjct 2612 AAGTCCTGTGCTTTGACCTGTCG-AATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAG 2554
Query 37935 TTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAG 37994
|| | || || | ||||| ||| | || ||||| ||| ||||||||| ||
Sbjct 2553 CTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAG 2494
Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054
||| ||||| || || || | ||| || | ||| |||| ||| | || ||
Sbjct 2493 GCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGC-GT 2435
Query 38055 A-AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT-TAGAAAA 38112
| || | || || | ||||| || || | | |||||| || | |||||
Sbjct 2434 AGAACATGTCGCGGGCACGGACCTCTTCCTTGCC-AGTGTTTTTCTTTAGATCGAGAAAC 2376
Query 38113 TCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCA 38172
||||||| |||| | ||||| ||||| | ||| || | | |||||| || ||||| |
Sbjct 2375 TCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTG 2316
Query 38173 CCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCA 38232
|| ||||||| | || | | || || || || | | | ||| || || | ||
Sbjct 2315 CCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCG 2256
Query 38233 TTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCG-A 38291
|| || | |||||| | ||||| || || || ||||| || || || | | ||
Sbjct 2255 TTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGAT-GCAGTGCACGTT 2197
Query 38292 CAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATAT 38351
|| || || ||||| || ||||| || | || ||||| || | ||||| | ||
Sbjct 2196 CAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAAT 2137
Query 38352 ACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGG 38411
||| || || || ||||| || | || | |||||| ||| | |||||| |
Sbjct 2136 ACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTG 2077
Query 38412 AGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATT 38471
|| | || ||| | || || || || || | || | ||| |||| |||
Sbjct 2076 CGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATT 2017
Query 38472 ATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAG 38531
||| ||||| || | |||| || | | ||||| || || | || || | ||| ||
Sbjct 2016 ATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAG 1957
Query 38532 CATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAA 38591
|||||| ||||||| || | |||||| || || || | || ||| ||| ||
Sbjct 1956 CATATGCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAA 1897
Query 38592 TGTTTTTATTCCAAAATA 38609
|||||| | || |||||
Sbjct 1896 TGTTTTAAAGCCGAAATA 1879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468346942129360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |