Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq25975 136 4e-27 >seq25975 Length=7706 Score = 136 bits (150), Expect = 4e-27 Identities = 1139/1818 (63%), Gaps = 44/1818 (2%) Strand=Plus/Minus Query 36817 GCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAA 36876 |||| || || | || ||||||||| |||||||| | |||| | |||| ||||| ||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 36877 TGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATAT--ATATTGTCATTGATTGAC 36934 || || ||||| || |||| | || | | | | |||||| | ||||| Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTG--AACGATTGCG 3560 Query 36935 TTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT---TGAGATA 36991 ||||| ||||||||||| | || |||||||||| | | || |||| |||||| Sbjct 3559 ACTGATCGATAAACGCACCGCGATCCGCTGCCATTT-TGATGCACGTTTTCACTGAGAT- 3502 Query 36992 TCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAA-TCTAAATGTT--GAA 37048 |||||| |||||||| || | | || | | || | | ||| ||| || ||| Sbjct 3501 -CTCCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAA 3443 Query 37049 TAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTA 37108 | || ||||| | ||| ||| ||||| || || || ||| | || | || Sbjct 3442 TTGATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATA-ATCCCATGTTG 3384 Query 37109 TT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTT 37167 | || || || || || | ||||| |||||||| || || |||| || | ||| Sbjct 3383 GTCAGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTA 3324 Query 37168 GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTA 37227 | |||| || || || || || | || ||||| || | | ||||| | ||| Sbjct 3323 TTGTATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTC 3264 Query 37228 GATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTC 37287 || || || ||||| || || | || || ||| | | || || | ||| | Sbjct 3263 GAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTT 3204 Query 37288 TTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGT 37347 | || | || ||| | ||| | || || || | ||| |||||| || || || Sbjct 3203 TCCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGC 3144 Query 37348 AGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCT 37407 || || || |||||| | ||| | | | || || || || ||||| | | || Sbjct 3143 AGGATGCCCTTACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCC 3084 Query 37408 AGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAAT 37467 | || || |||| ||| ||||| | |||| || |||||||| |||||| || | Sbjct 3083 AACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGC 3024 Query 37468 ATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCC 37527 ||| || || ||||| ||| | | ||||| || ||| || ||| |||| |||| ||| Sbjct 3023 TTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCC 2964 Query 37528 TGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATC---TAGACGATTCTATCACT 37584 |||||||| ||||| ||||||| || | | || || | ||| | || || Sbjct 2963 TGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCC---TCCGGGACA 2907 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATT 37644 ||||| || |||| ||| || || || || ||||| || ||| || | | | Sbjct 2906 GGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCC 2847 Query 37645 CTCAACTTGTCGAACATAAATACGTTATTA------TTAACAAATTTACTCAACGAAATA 37698 ||| |||| | | | ||||||| ||| || ||||| | |||| | ||| Sbjct 2846 TTCAGCTTG--GTAAAATCATACGTT-TTATCTTGCTTTACAAACATGTTCAAAGCAATC 2790 Query 37699 GATCCTAGATTACATACAGCAACTTCAT-CTTCGTTACTAA-ATTGTATAATCTCTGTAC 37756 || | ||||| || || || ||||| | ||||| || || | | | ||| || || | Sbjct 2789 GAGGCCAGATTGCACACCGCTACTTCGTCCTTCG--ACGAATACTCCACAATTTCGGTGC 2732 Query 37757 AGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAAT 37816 | || || || |||| ||||| | ||| ||||| ||| ||| || | || Sbjct 2731 ACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCAT 2672 Query 37817 CTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATA 37876 | || || || || || || || ||| | || | |||||| || | ||| Sbjct 2671 CCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCA-C 2613 Query 37877 AACTTCT-TGCTTT-AACGATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAA 37934 || | || |||||| | | ||| ||| || | | ||||| | | || | Sbjct 2612 AAGTCCTGTGCTTTGACCTGTCG-AATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAG 2554 Query 37935 TTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAG 37994 || | || || | ||||| ||| | || ||||| ||| ||||||||| || Sbjct 2553 CTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAG 2494 Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054 ||| ||||| || || || | ||| || | ||| |||| ||| | || || Sbjct 2493 GCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGC-GT 2435 Query 38055 A-AATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT-TAGAAAA 38112 | || | || || | ||||| || || | | |||||| || | ||||| Sbjct 2434 AGAACATGTCGCGGGCACGGACCTCTTCCTTGCC-AGTGTTTTTCTTTAGATCGAGAAAC 2376 Query 38113 TCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCA 38172 ||||||| |||| | ||||| ||||| | ||| || | | |||||| || ||||| | Sbjct 2375 TCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTG 2316 Query 38173 CCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCA 38232 || ||||||| | || | | || || || || | | | ||| || || | || Sbjct 2315 CCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCG 2256 Query 38233 TTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCG-A 38291 || || | |||||| | ||||| || || || ||||| || || || | | || Sbjct 2255 TTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGAT-GCAGTGCACGTT 2197 Query 38292 CAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATAT 38351 || || || ||||| || ||||| || | || ||||| || | ||||| | || Sbjct 2196 CAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAAT 2137 Query 38352 ACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGG 38411 ||| || || || ||||| || | || | |||||| ||| | |||||| | Sbjct 2136 ACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTG 2077 Query 38412 AGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATT 38471 || | || ||| | || || || || || | || | ||| |||| ||| Sbjct 2076 CGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATT 2017 Query 38472 ATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAG 38531 ||| ||||| || | |||| || | | ||||| || || | || || | ||| || Sbjct 2016 ATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAG 1957 Query 38532 CATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAA 38591 |||||| ||||||| || | |||||| || || || | || ||| ||| || Sbjct 1956 CATATGCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAA 1897 Query 38592 TGTTTTTATTCCAAAATA 38609 |||||| | || ||||| Sbjct 1896 TGTTTTAAAGCCGAAATA 1879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468346942129360