Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq24704 100 3e-16
seq9735 96.9 3e-15
seq29242 86.0 6e-12
>seq24704
Length=53625
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| ||||||||||| || ||||| || ||| || |||| || | || || |||||
Sbjct 37679 TGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCCTCCAGCTG 37621
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
||||| || |||||||||| |||||||| || || || || || ||||| ||| ||
Sbjct 37620 CTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTGGATCTT 37561
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|| | | || | || || | |||||| ||||||| ||| | ||||| || ||
Sbjct 37560 CGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGT 37501
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
| ||||| ||||| || |||||
Sbjct 37500 GAGGGTTTTGACGAAGATCTGCAT 37477
>seq9735
Length=15595
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| || || || || ||||| || || ||| | |||| || || |||||
Sbjct 4812 TGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCATCCTCCAGCTGC 4753
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| || ||| |||||||||| |||||||| ||||| |||||||| || || ||| ||
Sbjct 4752 TTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCTTG 4693
Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741
|| | | || | ||||| | ||||| ||||||| || | |||||||||||
Sbjct 4692 GCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGGTG 4633
Query 139742 AACGTTTTTACGAATATTTGCAT 139764
| |||||| ||||| || |||||
Sbjct 4632 AGCGTTTTCACGAAAATCTGCAT 4610
>seq29242
Length=5648
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || ||||||||||| || || |||| ||||| ||||| || ||
Sbjct 5446 GTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 5505
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
||| |||||||||| |||||||| || || || || || || || ||| | || | ||
Sbjct 5506 GCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATC-CTGAATCTTGGCCTT 5564
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | || |||| ||||| ||||| | || | ||||| ||||||| |||
Sbjct 5565 GACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAGCGT 5624
Query 139747 TTTTACGAATATTTGCATA 139765
||| || || || ||||||
Sbjct 5625 TTTCACAAAAATCTGCATA 5643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495875687904800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |