Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq25975 466 3e-126 seq22281 147 3e-30 >seq25975 Length=7706 Score = 466 bits (516), Expect = 3e-126 Identities = 1235/1858 (66%), Gaps = 46/1858 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || || || | ||| ||||| || ||||| | ||| | |||| ||||||||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || || || | || || || | || ||||| | ||||| Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 |||||||| || || || | || || |||||||| ||| ||| || || || ||| Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCC 3498 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTT-CTGGAAGGTTTGTAT--TCTGAATGGA 78974 || | ||||| |||| |||| ||| |||| | ||| || | || | ||||| || Sbjct 3497 CATACCGTTTTGTAAAGATCGCG-AATTTCTTGCGGGATAGTCTCAATCTTTTGAATTGA 3439 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 |||| | | || |||| ||||| || || || ||||||| | | ||| | Sbjct 3438 TCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAG 3379 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | | |||||||| | || || || ||||| || || || | || | | | |||| Sbjct 3378 ATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTA 3319 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 | || || || || || | ||||||||| || || | |||||| || || || || Sbjct 3318 TACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGC 3259 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCTT 79213 ||| ||||| || |||| || | ||| | | ||||| | || ||||| || | Sbjct 3258 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCT-ATTTTTTCCT 3200 Query 79214 TTAGAGATTCC---CAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTA 79270 | | | ||| || | ||| || |||| ||| | ||||| | || || || | Sbjct 3199 TCA---ACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCA 3143 Query 79271 GAATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCT 79329 | || || ||||| | || | | ||| ||| ||||| || ||||| || |||| Sbjct 3142 GGATGCCCTTACTCACCGGACTACCCTC-GTACGTTTCGTACGGTCCATCACGAGCGGCC 3084 Query 79330 AATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGA 79389 || ||||| || || || | ||||||| |||| ||||||||||| || | | || || Sbjct 3083 AACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGC 3024 Query 79390 TCTTGTGCTTCTAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCTGCTAAT 79446 | ||| || || ||| || | ||||| |||||| | ||||| || || | | Sbjct 3023 TTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGA---TGAACGCATCGGCCATT 2967 Query 79447 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATA 79506 || |||||||| |||||||| |||| || | | | || || | ||| || || | | Sbjct 2966 CCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACA 2907 Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACA 79563 ||||| || || | ||| || || || || ||||| | | ||||| ||| | | || Sbjct 2906 GGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTAT--CTTAG-CGACT 2850 Query 79564 TCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA---TTACAAACATGTTCAACGCGACA 79620 ||||| || ||| ||||||| | | |||| |||||||||||||||| || | Sbjct 2849 TCCTTCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATC 2790 Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGC 79678 || |||||||| || || ||||| || | | || || ||| | | ||||| |||| Sbjct 2789 GAGGCCAGATTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGC 2732 Query 79679 AGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 79738 | ||||| ||| ||||||||||| | ||| || |||||||| || || || |||| Sbjct 2731 ACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCAT 2672 Query 79739 CCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 79798 |||| || || ||| | || || ||||| | ||| || || || ||||| ||| | Sbjct 2671 CCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACA 2612 Query 79799 CGACTCGAGCCTTTAT-TATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATA 79855 | | | || || | | | || | | | ||| | ||||| ||||| | Sbjct 2611 AGTCCTGTGCTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGC 2553 Query 79856 ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCA 79915 || |||||||| || ||||| ||| | | || ||||| |||| |||||||||| Sbjct 2552 TTC--TCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCA 2495 Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 79975 |||| | ||| ||| || || ||||| || ||||| || ||||| ||||| Sbjct 2494 GGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGT 2435 Query 79976 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 80035 || | || | || | ||| || || || || || || || |||||||| ||| Sbjct 2434 AGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACT 2375 Query 80036 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTC 80095 | | | |||| |||||||||||||| || ||||| | |||| || | |||||| | Sbjct 2374 CGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGC 2315 Query 80096 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 80155 | |||||||| | ||| | || || || || || || | || ||| || | | || | Sbjct 2314 CGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGT 2255 Query 80156 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGA 80213 | || |||| || || |||||||| || |||| | || || || | | | || | Sbjct 2254 TTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCA 2195 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 | || || || || ||| || || || | || ||| | || | ||||| || || Sbjct 2194 --GCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAAT 2137 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 ||||| |||||||||||| |||| | || ||||||||| ||| | || | || Sbjct 2136 ACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTG 2077 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 || |||| ||| | ||| || || ||||| ||||| | ||||||||| ||||| Sbjct 2076 CGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATT 2017 Query 80394 GTACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACACGCATTA 80452 ||||| || || |||| || || | || | || || || | ||||| ||||| | Sbjct 2016 ATACGTTTCGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCA 1958 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 ||| ||||| |||| ||||| || || ||||| || | |||||| ||| ||||| Sbjct 1957 GCATATGCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCA 1898 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 | |||||||| || ||||||||||| |||||| || ||||||||||| ||||||| Sbjct 1897 ATGTTTTAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAATTGCCGAGTT 1840 >seq22281 Length=11977 Score = 147 bits (162), Expect = 3e-30 Identities = 192/261 (74%), Gaps = 11/261 (4%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| || ||||| ||||||||||| || ||||| | ||| || ||||| Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--TG 50065 || || |||||||| ||||| ||||||||||| || ||||| || ||||| || || || Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167 Query 50066 ACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG 50125 | | | |||||||| ||||| || ||||| || || || | | ||| || | | | Sbjct 3168 CCGCTG--AAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAG 3225 Query 50126 CGCTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 | || || || ||||| ||| | ||||| || |||||||| || || || |||| Sbjct 3226 C-CT-TCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAG 3283 Query 50181 CGTTTCTATGGCATTAAAGAG 50201 |||||| ||||||||||| || Sbjct 3284 CGTTTCGATGGCATTAAACAG 3304 Score = 86.0 bits (94), Expect = 9e-12 Identities = 176/262 (67%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 50230 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 50289 ||||| ||||||| || ||||| || || | |||||| || || ||||| || Sbjct 3419 TAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCATCGCAATCTGGAAC 3478 Query 50290 CCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTT 50349 ||||||||||| | || || || | ||| || || | ||| ||||| | | ||| Sbjct 3479 CCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTGGCTAAAGCGTTCCACCAGATTC 3538 Query 50350 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTT 50409 || ||||| || || || || ||||| || || | || || || || || | Sbjct 3539 TCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGGAAATGAAGTGACGT 3598 Query 50410 TCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 50469 ||| | ||| | || || ||| || || ||||| || || | ||| || || ||||| Sbjct 3599 TCGCTCGGTTTCAGCGCATCCCAGTCCTTCATATCCTTGGACAGATCAACCTCCTCCACC 3658 Query 50470 GTCCAAAATGATGCCTCTGCCT 50491 ||||| || || ||||| |||| Sbjct 3659 GTCCAGAACGAAGCCTCCGCCT 3680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717996136185160