Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 394 1e-104
seq22281 118 1e-21
>seq25975
Length=7706
Score = 394 bits (436), Expect = 1e-104
Identities = 1233/1890 (65%), Gaps = 50/1890 (3%)
Strand=Plus/Minus
Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCT 70851
||||||| |||||||| || | | || | || || || | ||| ||||||||
Sbjct 3707 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCA 3648
Query 70852 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGA 70911
||||| | ||| | |||| ||||| ||||| || ||| || || ||| | ||
Sbjct 3647 GTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTGGGT 3588
Query 70912 TCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 70971
|| || | ||||||||| | ||| || |||||||| || || || | || || |||
Sbjct 3587 TCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCC 3528
Query 70972 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATC 71030
||||| ||| ||| || || || ||||| | ||||| |||| |||| ||| ||
Sbjct 3527 ATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCG-AATTTC 3469
Query 71031 TT-CTGGAAGGTTTGTAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGAT 71087
|| | ||| || | || | ||||| |||||| | | | |||| || || ||
Sbjct 3468 TTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTCAT 3409
Query 71088 CTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTG 71147
|| || ||||||| | | ||| | | | |||||||| | || || || ||
Sbjct 3408 ATCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACCTG 3349
Query 71148 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTC 71207
||| || || || | || | | | |||| | || || || || || | || ||
Sbjct 3348 AAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATTC 3289
Query 71208 ATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATT 71267
||| || || | |||||| || || || || |||||||| || |||| || || |||
Sbjct 3288 ATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATT 3229
Query 71268 TCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGATTCC---CAATTCCAAAGATCC 71322
| | ||| ||| | || ||||| || || | | ||| || ||||| || ||
Sbjct 3228 GCGGATACC--GTGCTTGGCTATTTTTTCCTTCA---ACTCCGACCAGTTCCACAGCTCA 3174
Query 71323 GATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT-AGCGTATGATCCTGC 71381
| || | ||||| ||||| | || | | ||| |
Sbjct 3173 GTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCT-C 3115
Query 71382 ATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATA 71441
|| || ||||| ||||| || |||| | ||||| || || || | |||||| |
Sbjct 3114 GTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGAA 3055
Query 71442 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATA 71501
||| ||||||||||| || | | || || | ||| || ||| ||| || | |||||
Sbjct 3054 ATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGGATA 2995
Query 71502 AT---TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTG 71558
|||||| | ||||| || || | ||| ||||| || |||||||| |||| |||
Sbjct 2994 GCGCATTAAGA---TGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTG 2938
Query 71559 TCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 71618
| | | || || | ||| || || | |||||| || || | ||| || || || ||
Sbjct 2937 GCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTT 2878
Query 71619 GAGATTTC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCC 71675
||||| | | ||||| ||| | | || ||||| || ||| ||||||| | |
Sbjct 2877 CAGATTGCGCGTTACTAT--CTTAG-CGACTTCCTTCAGCTTGGTAAAATCATACGTTTT 2821
Query 71676 ATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732
|||| ||||||||| |||||| |||| || |||||||| || || ||||| || |
Sbjct 2820 ATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTC 2761
Query 71733 AGCATCGGC--ATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790
| ||| | ||| | | |||||| ||||| || || ||| || |||||||| | |
Sbjct 2760 --CTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACA 2703
Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850
|| || |||||||| || || || |||||||| || || || | || || |||
Sbjct 2702 TTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTT 2643
Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTAT 71910
|| | ||| || || || ||||| ||| | | | | || || | || ||
Sbjct 2642 TCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTTGACCTG--TCGAATAA 2585
Query 71911 CTCTTTTCTCTTTC--GTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT 71966
| ||||||| ||| ||||| | || |||||||| || ||||| | ||
Sbjct 2584 AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTC--TCGAACTCTTCACCCCACGTATC 2527
Query 71967 GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCG 72026
| | || ||||| || | |||||||||| |||| | ||| | | || ||
Sbjct 2526 TGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACG 2467
Query 72027 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTC 72086
||||| || ||||| || ||||| ||||| || | || | || | ||| ||
Sbjct 2466 CTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTC 2407
Query 72087 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 72146
|| || || || || || |||||||| ||| | | | |||| ||||||||||||||
Sbjct 2406 CTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAG 2347
Query 72147 GTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 72206
|| ||||| | |||| |||| |||||| || |||||||| | ||| | || || ||
Sbjct 2346 ATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATT 2287
Query 72207 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 72266
|| || || | || ||| || | | || || || ||| || || |||||||| ||
Sbjct 2286 GTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTA 2227
Query 72267 GCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 72324
|||| | || || || | ||| || | | || || || || ||| || ||
Sbjct 2226 TGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GCCCAATGCCACCGGCCGACTTTGAA 2169
Query 72325 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384
|| | || ||| | || | ||||| || || ||||| || |||||||| |||| |
Sbjct 2168 ATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTC 2109
Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444
|| ||||||||| ||| | || | || || |||| ||| | ||| || ||
Sbjct 2108 AGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAG 2049
Query 72445 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 72504
||||| ||||| | ||||||||| ||||| ||||| || || |||| || || |
Sbjct 2048 GCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGATCGCTGCATCGATGTTT 1989
Query 72505 -CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTT 72563
|| | || || || | ||||| ||||| | ||||||||| |||| ||||| || ||
Sbjct 1988 TCACCG-TGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGCTCAACAATTTT 1930
Query 72564 GTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 72623
||||| || | |||||| ||| |||||| |||||||| || |||||||||||
Sbjct 1929 ACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAGCCGAAATAGTTGTACCC 1870
Query 72624 AAAGTCTCGTTCGTAAATAATAACCGAATT 72653
|||||| || ||||||||||| |||| ||
Sbjct 1869 AAAGTCGCGATCGTAAATAATTGCCGAGTT 1840
>seq22281
Length=11977
Score = 118 bits (130), Expect = 1e-21
Identities = 183/259 (71%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112
|| ||||||| || ||||| ||||||||||| || || || | ||| | |||||
Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107
Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172
|| || |||||||| ||||| ||||||||||| || ||||| || || || || ||
Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167
Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232
|| |||||||| ||||| || || || || || | | | ||| || | ||
Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGC- 3226
Query 42233 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287
|| || || ||||| ||| | ||||| || |||||||| || || || |||| ||
Sbjct 3227 CT-TCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 3285
Query 42288 TTTCTATGGCATTAAAGAG 42306
|||| ||||||||||| ||
Sbjct 3286 TTTCGATGGCATTAAACAG 3304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670884427170440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |