Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq9735 91.5 1e-13 seq3879 89.7 5e-13 >seq9735 Length=15595 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || | ||||| || ||||| || || || ||||| ||| | |||| Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || || || || || || ||| |||||||||| |||||||| ||||| |||||||| || Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || || | | || | |||||||| || || || |||| || | Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||||||||| | ||||| ||||| || ||||| Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610 >seq3879 Length=3897 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 143046 || || || || || |||||||||||| || || | || | || || || || ||||| Sbjct 3887 GTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCA-TCCTCCAGCTGCTTACC 3829 Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106 || |||||| ||| |||||||| ||||| ||||| || ||||| || || || Sbjct 3828 GGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 3769 Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | || | |||||||| || || || || | ||| | |||||||| |||| || Sbjct 3768 CACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGT 3709 Query 143167 TTTTACGAATATTTGCAT 143184 ||| ||||| || ||||| Sbjct 3708 TTTCACGAAGATCTGCAT 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506821930996080