Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq9735 91.5 1e-13
seq3879 89.7 5e-13
>seq9735
Length=15595
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029
|||| || | ||||| || ||||| || || || ||||| ||| | ||||
Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765
Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089
|| || || || || || ||| |||||||||| |||||||| ||||| |||||||| ||
Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705
Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149
|| || || || | | || | |||||||| || || || |||| || |
Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645
Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||||||| | ||||| ||||| || |||||
Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610
>seq3879
Length=3897
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 143046
|| || || || || |||||||||||| || || | || | || || || || |||||
Sbjct 3887 GTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCA-TCCTCCAGCTGCTTACC 3829
Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106
|| |||||| ||| |||||||| ||||| ||||| || ||||| || || ||
Sbjct 3828 GGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 3769
Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
| | || | |||||||| || || || || | ||| | |||||||| |||| ||
Sbjct 3768 CACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGT 3709
Query 143167 TTTTACGAATATTTGCAT 143184
||| ||||| || |||||
Sbjct 3708 TTTCACGAAGATCTGCAT 3691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506821930996080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |