Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq25975 255 9e-63 seq2281 188 1e-42 seq22281 140 5e-28 seq1284 87.8 3e-12 >seq25975 Length=7706 Score = 255 bits (282), Expect = 9e-63 Identities = 944/1458 (65%), Gaps = 42/1458 (3%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAAT--GTCACGATACGTTACACAGGGCGGCAATA 96888 ||||| ||||| | ||||||| |||| | |||| ||||| ||||||||||| | Sbjct 2263 GTGCCGATGCTGCGCGTGTACAA--CAATACGGCACGGTACGTGGATCAGGGCGGCAACA 2320 Query 96889 AACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTA 96948 || |||| || || | ||| |||| ||||||| ||||| | || || || || ||| Sbjct 2321 AAAGGCCTGGAGCATTCGCCATCTATCTGGAACCGTGGCATGGTGATGTATTCGAGTTTC 2380 Query 96949 TCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCAC 97008 |||| | |||||| ||||| ||||||| || ||| | ||| |||| || || | Sbjct 2381 TCGATCTAAAGAAAAACACTGGCAAGGAAGAGGTCCGTGCCCGCGACATGTTCTACGCTC 2440 Query 97009 TCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGT 97068 | ||| | || ||| ||||||||||||| || | | || |||||||| |||| Sbjct 2441 TGTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAATGAAATGTGGAGCCTGATGT 2500 Query 97069 GCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACA 97128 | || || | ||||||||| | ||| ||||| |||||||| ||| ||||| Sbjct 2501 GTCCACACGATTGTCCCGGTCTGGCAGATACGTGGGGTGAAGAGTTCGAGAAGCTGTACA 2560 Query 97129 CGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAACTGTGGAAGG 97188 ||| |||||| ||||||| || | | ||| ||| | |||| || ||||| | Sbjct 2561 CGGGGTACGAGAAAGAGGGTCGCTTTATTCGACAGGTCAAAGCACAGGACTTGTGGTTCG 2620 Query 97189 CCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGA 97248 | ||| | | | ||||| || || || || ||||| || ||||||||| | | Sbjct 2621 CGATCATCGAGTCGCAGGTGGAAACGGGCGTACCATACATGCTGTACAAGGATGCATGCA 2680 Query 97249 ATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAA 97308 |||| || || || || | | | || ||||| || | ||||| |||||||| |||| Sbjct 2681 ATCGTAAAAGTAATCAGCAGAATGTCGGAACCATTAAATGTTCCAACCTGTGCACCGAAA 2740 Query 97309 TTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGC 97368 |||| ||||| | || |||||| || || ||| |||||| ||| | | || Sbjct 2741 TTGTGGAGTATTCGTCGAAGGACGAAGTAGCGGTGTGCAATCTGGCCTCGATTGCTTTGA 2800 Query 97369 CCAAGTTTGTAGAG---GGTAAAGTGTTTAATCT---CAACCTATTGGCAAAGACGGTGC 97422 || ||||||| || | |||| || | || | ||| || || ||| || | Sbjct 2801 ACATGTTTGTAAAGCAAGATAAAACGTATGATTTTACCAAGCTGAAGG--AAGTCGCTAA 2858 Query 97423 GTCTGGTGACTAGGAATCTAAACAAGATTATCGACAATGCACT-CTATCCCATTCCCTCG 97481 | | || || | ||||| |||||||| || || | ||| |||||| | | || Sbjct 2859 G-ATAGTAACGCGCAATCTGAACAAGATCATTGA-TGTCAACTACTATCC---TGTCCCG 2913 Query 97482 GCTGCCAAG---TCAAACTTTAAGCACCGACCCATCGGTATAGGAGTGCAAGGCTACGCA 97538 | || ||| || ||| | |||||||||||||||||||| || || || || Sbjct 2914 GAGGCTAAGCGCTCCAACATGCGCCACCGACCCATCGGTATAGGTGTTCAGGGAATGGCC 2973 Query 97539 GACGCTCTGGCCATGATG-GGTATAGCCTA------CGAGGA--CTCGATGCAGTTGAAT 97589 || || | | | ||| | ||| | || |||||| ||| | || |||| Sbjct 2974 GATGCGTTCATCTTAATGCGCTAT-CCGTACGAAAGCGAGGAGGCTCAA--AAGCTGAAC 3030 Query 97590 CGTGACATTTTCGAAACCATCTACCATGCAGCACTGACGGAGAGTTGCCAACTGGCC-AG 97648 | | || |||||||||||||| | ||||||| | || || | ||||| Sbjct 3031 CAACAAATATTCGAAACCATCTATTTCGGAGCACTGGAAGCTAGCTGTGAGTTGGCCGCT 3090 Query 97649 AGTGCACGGAGTCTACGAATCGTACCACGGTAGCCCGACCAGTCGTGGAGAGTTGCACTT 97708 ||| | ||| |||||| ||||| | ||||| ||| ||| || |||| | Sbjct 3091 CGTG-ATGGACCGTACGAAACGTACGAGGGTAGTCCGGTGAGTAAGGGCATCCTGCAGTA 3149 Query 97709 CGA---CCGATACTCGGTGCACAGCCAAAAGTGTGACTGGTCATCGTTGCGCAAAGACAT 97765 ||| | || || || | | ||| ||||||| |||| || | || Sbjct 3150 CGAAATGTGGAACAAGGAGCCGACTGAGCTGTGGAACTGGTCGGAGTTGAAGGAAAAAAT 3209 Query 97766 TGCTCGGTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTC 97825 || | ||||| | | || || ||||| |||| |||||||| |||||| | || | Sbjct 3210 AGCCAAGCACGGTATCCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCGACAGC 3269 Query 97826 CCAAGTGTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACG 97885 |||| | ||||||| |||||| || || || | |||||| ||| | ||| | ||||| Sbjct 3270 CCAAATTCTTGGCAACAATGAATCGTTCGAGCCCTACACGTCGAACGTATACAATAGACG 3329 Query 97886 CACCCAGTCTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTG--GAACGG 97943 | | || || |||||||| || ||| || | | | || || ||| Sbjct 3330 CGTGCTATCGGGTGAGTTTCAGGTGGTAAACCACCATCTCCTGCAGGATCTGACCAACAT 3389 Query 97944 CTCAATCTGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAA 98003 | | || ||| | || ||| | ||| ||| |||||||| || |||||| Sbjct 3390 GGGATTATG-GGATC-TCGATATGAAGAACGAGATTCTGTCGAACAATGGATCAATTCAA 3447 Query 98004 AACATTACCATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCG 98063 || ||| | |||||| |||| | ||| | ||||| || || |||||||| | Sbjct 3448 AAGATTGAGACTATCCCGCAAGAAATTCGCGATCTTTACAAAACGGTATGGGAGATCTCA 3507 Query 98064 ACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCG 98123 || ||| ||| | ||||| || || | |||| | || || ||| |||||| Sbjct 3508 GTGAAAACGTGCATCAAAATGGCAGCGGATCGCGGTGCGTTTATCGATCAGTCGCAATCG 3567 Query 98124 TTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATACACTTTTACGCA 98183 |||||| | |||| || || |||| |||| || |||| ||||| || || |||| Sbjct 3568 TTCAATATTCACGTCGCGGAACCCAACTACGGTAAGCTGACGTCGATCCATTTCTACGGG 3627 Query 98184 TGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAATGCC 98243 ||||| | ||| | || || |||||||| ||| || | || ||| ||||| ||||| Sbjct 3628 TGGAAAATGGGTTTGAAAACTGGCATGTATTATTTGCGCACCAAGCCGGCCGTAAATGCG 3687 Query 98244 ATACCATTTACGGTGGAC 98261 || | |||||||||||| Sbjct 3688 ATCCAGTTTACGGTGGAC 3705 >seq2281 Length=19522 Score = 188 bits (208), Expect = 1e-42 Identities = 362/533 (68%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 49797 CCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCGAGC 49856 |||| || || | ||||| | ||||||||||| || ||| ||| ||||| | |||| Sbjct 11072 CCGTCGAACCATCGATGTTCATGTACATGATGGCGTTTATGCTGACGTCGGTCGTGGAGC 11131 Query 49857 AGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGTGCC 49916 | || |||| | | ||| |||||||||| ||| | |||||||| |||| ||| | |||| Sbjct 11132 AAGCCTTTTTCCTCTACAAAGCGTGCACTGTCGATCATGGCTATTCGCACGAGATTTGCC 11191 Query 49917 ACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACATTTC 49976 |||| | |||||| | |||||||| || | |||||| ||| || || |||| Sbjct 11192 TCAACCTCGAGCAGTACCAGGACATCAAAAAGCAGGTCCAGGTGACGACTTCCACCTTTC 11251 Query 49977 ATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAGGAT 50036 ||||||||||| | | || | ||||||| ||| | ||| ||||| | || || || Sbjct 11252 ATCAGTGGAACAATATTGCTATGTATGTGGTACCCATCATACTGGCCCTGTTTCTCGGTG 11311 Query 50037 CCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAACTCT 50096 ||| || || || || | ||| | ||| | ||||| | || || | Sbjct 11312 CCTGGTCGGACAGACGTGGACGCAAGTTGCCACTAATCCTGGGACTGATGGGCAAGTTTG 11371 Query 50097 TTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAG---AGCTGGCCCGTAGAGTATATAA 50153 | | ||||| ||| | || |||| | || | ||||| || || || || | Sbjct 11372 TCTACTCGGTCATGATCGTAGTGAACACGCGCATGCCTTCGTGGCCGGTGGAATACATCA 11431 Query 50154 TCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAGCGT 50213 ||||||||||| | ||||||| | || ||||| |||||| | | || || || | | Sbjct 11432 TCTACACGGCAACGATTCCGAGCGTTCTGACCGGGGCCGATATTGCTATCTTTGCCTCCT 11491 Query 50214 GCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCATCT 50273 ||||||| ||||| |||| | |||| |||||| | || ||||| || | || | Sbjct 11492 GCTTTGCGTACATCTCCGACATCACGACGGTGGAGGAACGTACGCTGCGTATCACGATAT 11551 Query 50274 TGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTG 50326 |||| ||| |||||| || || ||||| | |||||| ||| | || | |||| Sbjct 11552 TGGACGCCACCTACCTCAGTACCATGCCGATCGGTGTCGCGCTTGGGAATGTG 11604 >seq22281 Length=11977 Score = 140 bits (154), Expect = 5e-28 Identities = 237/341 (70%), Gaps = 13/341 (4%) Strand=Plus/Minus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| ||||||||||| || || |||||||| || || || || |||| || ||| Sbjct 3205 GTGGCTTTCGCCGCCGTCGAAGGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGG 3146 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || || ||||| ||||| || | |||||| | || || || ||| Sbjct 3145 CTCAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGAC 3086 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609 || || || ||||| ||||| ||| || |||| ||| |||||| |||| Sbjct 3085 GAAGGGCTGCACTGCGACTTCGCCTGCCTGATGTT---CAAGTATCTG--------GTGC 3037 Query 125610 AG-ATCCAGCGATGAAAAG-GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667 || | || ||| | | | || | ||||| | |||||| || ||| || || | Sbjct 3036 AGAAGCCGTCGAAGGAGCGCGTGACGGACATTATTCGCGATGCGGTTGTGATCGAGCAGG 2977 Query 125668 AGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG 125727 |||| | || | | || || || |||| |||||||||||||| | || |||| Sbjct 2976 AGTTCTTGACGAAGGCACTGCCCGTTGACATGCTTGGCATGAACTGCGATCTGATGTCGC 2917 Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG 125768 ||||||| ||||||||||| |||||| | ||| |||| || Sbjct 2916 AGTACATCGAGTTTGTGGCTGATCGTTTGCTGCTCGAGCTG 2876 Score = 105 bits (116), Expect = 1e-17 Identities = 190/278 (68%), Gaps = 11/278 (4%) Strand=Plus/Minus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 |||| |||| || || |||||||| || ||||| |||||||||||||| || | || | Sbjct 3680 AGGCGGAGGCTTCGTTCTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACT 3621 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGA----GAGTTTATATCGCACATTTTGGCCTTC 125153 |||| | ||||||| |||||| | || || || ||| | | |||||| Sbjct 3620 GGGA-------TGCGCTGAAACCGAGCGAACGTCACTTCATTTCCCACGTGCTTGCCTTC 3568 Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213 ||||||| |||||||| ||||| ||||| |||||| || ||| || || ||| | Sbjct 3567 TTTGCCGCTTCCGATGGCATCGTGAACGAGAATCTGGTGGAACGCTTTAGCCAGGAGGTA 3508 Query 125214 ACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCG 125273 | | || | || || ||||| ||||| || ||| || ||||||||| Sbjct 3507 CAGGTAACGGAAGCACGCTGTTTCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGC 3448 Query 125274 GAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 || |||||||| ||||| |||| ||||| || || Sbjct 3447 GAGATGTACTCACTGCTGATCGACACTTACATCCGTGA 3410 >seq1284 Length=4647 Score = 87.8 bits (96), Expect = 3e-12 Identities = 230/344 (67%), Gaps = 8/344 (2%) Strand=Plus/Plus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGA-G 70132 |||| || |||||||| || |||||| | |||| || || || | || | | Sbjct 3213 TGGGCCCTGTGTACGGCTTTCAGTGGCGTCACTTTGGTGCCGCATACAAAACATGTCACG 3272 Query 70133 ACAGACTATTCGGGTCAGGGTGTTGATCAATTG-CAGACAATCATTGACACTCTCAAGAC 70191 || || ||| |||| || || | ||||| ||| | || | | || || | | |||| Sbjct 3273 AC-GATTATGCGGGACAAGGCATAGATCAGTTGGCTGA-AGTGATCGATAAAATAAAGAA 3330 Query 70192 CAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAAT 70251 ||||| ||| | | ||| | ||| || | ||||||||| | ||| | | | || Sbjct 3331 TAATCCTTTCGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCTGATATTCCGAACAT 3390 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTAC--TCGTACGATGGCAAATTGTCA 70309 ||| |||||||| || ||||| ||||| ||||||| | || ||||| | | || Sbjct 3391 GGCCCTACCACCATGCCACTGCTTGGCACAGTTTTTTGTTGGT--GATGGAGAGCTTTCG 3448 Query 70310 TGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGC 70369 ||| |||||||| | ||||| | || || || || || ||||||||||| || Sbjct 3449 TGCCAGATGTATCAACGTTCAGCCGATGTAGGTCTGGGCGTGCCTTTTAACATTGCTAGT 3508 Query 70370 TATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAA 70413 || || || |||| |||||||| || || | || || ||||| Sbjct 3509 TACTCCTTGCTGACCCACATGATCGCGCATGTCACAGGACTGAA 3552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740777884664440