Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq8435 96.9 3e-15 >seq8435 Length=16072 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 5320 TTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTC-AAAGTCGCTGTTTCCGA 5378 ||| || || | ||| || || | || || ||||| || || ||| |||| ||||| Sbjct 10995 TTCACAAATAAACTGTGCGATGCGATCGCCTTTCTTCACTTCGAAATTCGCC---TCCGA 11051 Query 5379 AG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCC 5436 || |||||||| || ||||| || || || ||||| || |||| ||||| || || Sbjct 11052 GTGATTGAACAGCACAACTCCGACGTTACCGCGATAGTCCTCATCGACGACGCCGGCACC 11111 Query 5437 CACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 ||| ||||| |||| ||| || || || |||||||||||||| | || || ||||| || Sbjct 11112 CACATCGATGAAGTTTTTCACTGCGAGACCGGAACGTGGTGCCACTCGGCCATAGCATCC 11171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447580428351280