Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq24506 104 3e-17 >seq24506 Length=9138 Score = 104 bits (114), Expect = 3e-17 Identities = 189/273 (69%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||| | | |||||| | ||||| | || || |||||| ||||||| Sbjct 4641 ATTGGGATTTCGGAAGAATGGGTATCGGTGGTTTGGACCGCGAATTTAACGCTATTTTCC 4582 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 | || |||||||| || | |||| ||| || | || | | || || |||| Sbjct 4581 GGCGTGCATTTGCATCACGTGTTTTTCCACCAGAAGTAGTTGAACAGCTGGGATGCAAAC 4522 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || ||||||| ||| | | |||||||||||||| || |||||| | ||||| ||| Sbjct 4521 ATGTAAAAGGCATTCTTCTTTATGGACCTCCTGGTACTGGAAAAACACTTATGGCACGAC 4462 Query 164573 GCATTGCT-CAA-GCTTTTAAATCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630 |||| | ||| ||| |||||| ||| || || ||||||||||| || | || Sbjct 4461 AAATTGGTACAATGCTGAACGCTCGCGAACCG--AAGATAGTTAATGGTCCGCAAATTTT 4404 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGT 164663 |||||||||| ||||| ||||| ||||| || Sbjct 4403 AGACAAATATGTTGGTGAATCAGAGGCTAACGT 4371 Score = 98.7 bits (108), Expect = 1e-15 Identities = 267/406 (66%), Gaps = 22/406 (5%) Strand=Plus/Minus Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT--------- 164772 |||||| |||| |||| ||||| || ||||| |||||||| |||||| Sbjct 4210 TTACATATTATAATTTTCGATGAAATTGATGCAATTTGCAAAGCTCGTGGTACTGTCGGA 4151 Query 164773 -GATAATAT--TATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829 || | | | | |||||||| | || || ||||| || | | ||||| ||||| ||| Sbjct 4150 GGAAATTCTGGTGTTCATGATACCGTTGTCAATCAACTGTTGGCAAAAATTGATGGAGTA 4091 Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889 || ||||| || || || | | || ||||| || ||| ||| | || || || Sbjct 4090 GAGCAATTAAACAACATATTGGTCATTGGGATGACTAATCGAAAAGATATGATAGACGAA 4031 Query 164890 GCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAA 164949 || |||||||||||||| || ||||| | |||| ||||| | | || || ||||| Sbjct 4030 GCGTTATTACGACCTGGCCGTCTAGAAGTACAAATGGAAATCAGCCTTCCTAACGAAGAA 3971 Query 164950 GGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAA---ATGAAATCCTGTGATATATTA 165006 || ||| | || ||||| || | ||| | | | |||||| | | | || Sbjct 3970 GGTCGCGTGCAGATTTTGAACATCCAT---ACAAGACGTATGAAAGAGTTCAAGAAGTTG 3914 Query 165007 TCTCCCGATGTAGATTTAAATAAAATAGCTGCC--GAAACTAAAAATTATAGTGGTGCTG 165064 |||| ||||| || ||| | || | | ||| |||| || |||| ||| ||||| | Sbjct 3913 GCTCCTGATGTGGACTTACGTGAACTTG--GCCAAAAAACCAAGAATTTTAGCGGTGCCG 3856 Query 165065 AATTAGAGGGATTAGTAAGAGCCGCTCAATCAACCGCATTAAGTCG 165110 || |||| || || || | || || || || || ||| | | ||| Sbjct 3855 AACTAGAAGGCTTGGTGCGTGCAGCGCAGTCTACAGCAATGAATCG 3810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595645799540400