Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq24506 104 3e-17
>seq24506
Length=9138
Score = 104 bits (114), Expect = 3e-17
Identities = 189/273 (69%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452
||||| |||| | | |||||| | ||||| | || || |||||| |||||||
Sbjct 4641 ATTGGGATTTCGGAAGAATGGGTATCGGTGGTTTGGACCGCGAATTTAACGCTATTTTCC 4582
Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512
| || |||||||| || | |||| ||| || | || | | || || ||||
Sbjct 4581 GGCGTGCATTTGCATCACGTGTTTTTCCACCAGAAGTAGTTGAACAGCTGGGATGCAAAC 4522
Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572
|| ||||||| ||| | | |||||||||||||| || |||||| | ||||| |||
Sbjct 4521 ATGTAAAAGGCATTCTTCTTTATGGACCTCCTGGTACTGGAAAAACACTTATGGCACGAC 4462
Query 164573 GCATTGCT-CAA-GCTTTTAAATCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630
|||| | ||| ||| |||||| ||| || || ||||||||||| || | ||
Sbjct 4461 AAATTGGTACAATGCTGAACGCTCGCGAACCG--AAGATAGTTAATGGTCCGCAAATTTT 4404
Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGT 164663
|||||||||| ||||| ||||| ||||| ||
Sbjct 4403 AGACAAATATGTTGGTGAATCAGAGGCTAACGT 4371
Score = 98.7 bits (108), Expect = 1e-15
Identities = 267/406 (66%), Gaps = 22/406 (5%)
Strand=Plus/Minus
Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT--------- 164772
|||||| |||| |||| ||||| || ||||| |||||||| ||||||
Sbjct 4210 TTACATATTATAATTTTCGATGAAATTGATGCAATTTGCAAAGCTCGTGGTACTGTCGGA 4151
Query 164773 -GATAATAT--TATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829
|| | | | | |||||||| | || || ||||| || | | ||||| ||||| |||
Sbjct 4150 GGAAATTCTGGTGTTCATGATACCGTTGTCAATCAACTGTTGGCAAAAATTGATGGAGTA 4091
Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889
|| ||||| || || || | | || ||||| || ||| ||| | || || ||
Sbjct 4090 GAGCAATTAAACAACATATTGGTCATTGGGATGACTAATCGAAAAGATATGATAGACGAA 4031
Query 164890 GCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAA 164949
|| |||||||||||||| || ||||| | |||| ||||| | | || || |||||
Sbjct 4030 GCGTTATTACGACCTGGCCGTCTAGAAGTACAAATGGAAATCAGCCTTCCTAACGAAGAA 3971
Query 164950 GGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAA---ATGAAATCCTGTGATATATTA 165006
|| ||| | || ||||| || | ||| | | | |||||| | | | ||
Sbjct 3970 GGTCGCGTGCAGATTTTGAACATCCAT---ACAAGACGTATGAAAGAGTTCAAGAAGTTG 3914
Query 165007 TCTCCCGATGTAGATTTAAATAAAATAGCTGCC--GAAACTAAAAATTATAGTGGTGCTG 165064
|||| ||||| || ||| | || | | ||| |||| || |||| ||| ||||| |
Sbjct 3913 GCTCCTGATGTGGACTTACGTGAACTTG--GCCAAAAAACCAAGAATTTTAGCGGTGCCG 3856
Query 165065 AATTAGAGGGATTAGTAAGAGCCGCTCAATCAACCGCATTAAGTCG 165110
|| |||| || || || | || || || || || ||| | | |||
Sbjct 3855 AACTAGAAGGCTTGGTGCGTGCAGCGCAGTCTACAGCAATGAATCG 3810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595645799540400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |