Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 417 1e-111
seq22281 140 4e-28
>seq25975
Length=7706
Score = 417 bits (462), Expect = 1e-111
Identities = 1214/1852 (66%), Gaps = 34/1852 (2%)
Strand=Plus/Minus
Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075
|| || || || || | ||| ||||| || ||||| | ||| | |||| ||||| |||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135
|| || ||| || || || | || || || | || ||||| | |||||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195
|||||||| || || || | || || |||||||| ||| ||| || || || |||
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCC 3498
Query 62196 CAAATAGTTTTATAAAC-TCGCTTAATATCTT-CTGGAAGGTTTGTAT--TCTGAATGGA 62251
|| | ||||| |||| |||| ||| |||| | ||| || | || | ||||| ||
Sbjct 3497 CATACCGTTTTGTAAAGATCGCG-AATTTCTTGCGGGATAGTCTCAATCTTTTGAATTGA 3439
Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311
|||| | | || |||| ||||| || || || ||||||| | | ||| |
Sbjct 3438 TCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAG 3379
Query 62312 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62371
| | |||||||| | || || || ||||| || || || | || | | | ||||
Sbjct 3378 ATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTA 3319
Query 62372 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62431
| || || || || || | ||| ||||| || || | |||||| || || || ||
Sbjct 3318 TACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGC 3259
Query 62432 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62491
|||||||| || |||| || | ||| | | ||||| | ||||| || ||
Sbjct 3258 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTT 3199
Query 62492 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62551
| ||| ||||| || || | ||| | || || ||
Sbjct 3198 CAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGAT 3139
Query 62552 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62610
|| ||||| | | || | ||| | || || ||||| ||||| || | || | |
Sbjct 3138 GCCCTTACTCACCGGACTACCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACT 3080
Query 62611 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62670
|||| || || || | ||| ||| |||| ||||||||||| || | | || || | ||
Sbjct 3079 CACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTT 3020
Query 62671 GTGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCCGCTAATCCTT 62727
| || ||| ||| || | ||||| |||||| | ||||| || || | ||| |
Sbjct 3019 GAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGA---TGAACGCATCGGCCATTCCCT 2963
Query 62728 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGAT 62787
||||||| |||||||| |||| || | | | || ||| | ||| || || | |||||
Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903
Query 62788 AATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCT 62844
| || || | ||| || || || || ||||| | | || || ||| | | || ||||
Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTAT--CTTAG-CGACTTCCT 2846
Query 62845 TCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGCAACAGATG 62901
|||| ||| ||||||| | |||| |||||||||||||||| |||| || |
Sbjct 2845 TCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGG 2786
Query 62902 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAG 62959
||||||| || || ||||| || | | || || ||| | | || || ||||| ||
Sbjct 2785 CCAGATTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAG 2728
Query 62960 ATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 63019
|| ||| || || ||||| | ||| || |||||||| || || || ||||||||
Sbjct 2727 GTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTT 2668
Query 63020 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 63079
|| || ||| |||| || ||||| | ||| || || || ||||| ||| | | |
Sbjct 2667 GTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTC 2608
Query 63080 TCGAGCCTTTAT-TATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTT 63138
| || || | | | || | | | | ||| | ||||| || |||| |
Sbjct 2607 CTGTGCTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCT 2549
Query 63139 CGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 63198
||||||| || ||||| || ||| || ||||| || | |||||||||| ||
Sbjct 2548 CGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCC 2489
Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258
|| | | | ||| ||| || ||||| || ||||| || ||||| ||||| || |
Sbjct 2488 ACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACA 2429
Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63318
|| | || | || || || || || || || || |||||||| ||| | | |
Sbjct 2428 TGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATA 2369
Query 63319 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63378
|||| |||||||||||||| || ||||| | ||||||||| |||||| || ||||
Sbjct 2368 CATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCT 2309
Query 63379 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63438
|||| | ||| | || || || || || || | || ||| || | | |||||||| |
Sbjct 2308 GATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAA 2249
Query 63439 TACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACC 63496
|||| || || |||||||| || |||| | || || || | | | || || ||
Sbjct 2248 TACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTT--CAGCCC 2191
Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556
|| || || ||| || || || | || ||| | || | || || || ||||||||
Sbjct 2190 AATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTC 2131
Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616
||||||||||| |||| | || ||||||||| ||| | || | || || |
Sbjct 2130 AATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGC 2071
Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676
||| ||| | ||| || || ||||| ||||| | |||||| || ||||| |||||
Sbjct 2070 CGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGT 2011
Query 63677 CTCAATAGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735
|| || |||| || || | || | || || || | ||||| ||||| | ||| |
Sbjct 2010 TTCGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATAT 1952
Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795
|||| |||| ||||| || || ||||| || | |||||| ||| |||||| ||||
Sbjct 1951 GCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTT 1892
Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847
|||| || ||||||||||| |||||| || ||||||||||| |||||||
Sbjct 1891 TAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAATTGCCGAGTT 1840
>seq22281
Length=11977
Score = 140 bits (154), Expect = 4e-28
Identities = 188/259 (73%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351
|| ||||||| || ||||| ||||||||||| || ||||| | ||| || |||||
Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107
Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411
|| || |||||||| ||||| ||||||||||| || ||||| || |||||||||||
Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471
|| |||||||| ||||| || || || || || | | | ||| || | ||
Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGC- 3226
Query 33472 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33526
|| || || ||||| ||| | ||||| || |||||||| || || || |||| ||
Sbjct 3227 CT-TCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 3285
Query 33527 TTTCTATGGCATTAAAGAG 33545
|||| ||||||||||| ||
Sbjct 3286 TTTCGATGGCATTAAACAG 3304
Score = 89.7 bits (98), Expect = 6e-13
Identities = 177/262 (68%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 33574 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33633
||||| ||||||| || ||||| || || | |||||| || || ||||| ||
Sbjct 3419 TAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCATCGCAATCTGGAAC 3478
Query 33634 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTT 33693
||||||||||| | || || || | |||||| || | ||| |||||| ||| |||
Sbjct 3479 CCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTGGCTAAAGCGTTCCACCAGATTC 3538
Query 33694 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33753
|| ||||| || || || || ||||| || || | || || || || | |
Sbjct 3539 TCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGGAAATGAAGTGACGT 3598
Query 33754 TCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 33813
||| ||| | || || ||| || || ||||| || || | ||| || || |||||
Sbjct 3599 TCGCTCGGTTTCAGCGCATCCCAGTCCTTCATATCCTTGGACAGATCAACCTCCTCCACC 3658
Query 33814 GTCCAAAATGATGCCTCTGCCT 33835
||||| || || ||||| ||||
Sbjct 3659 GTCCAGAACGAAGCCTCCGCCT 3680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622710721456040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |