Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq25975 417 1e-111 seq22281 140 4e-28 >seq25975 Length=7706 Score = 417 bits (462), Expect = 1e-111 Identities = 1214/1852 (66%), Gaps = 34/1852 (2%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || || || || || | ||| ||||| || ||||| | ||| | |||| ||||| ||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || || ||| || || || | || || || | || ||||| | ||||| Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 |||||||| || || || | || || |||||||| ||| ||| || || || ||| Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCC 3498 Query 62196 CAAATAGTTTTATAAAC-TCGCTTAATATCTT-CTGGAAGGTTTGTAT--TCTGAATGGA 62251 || | ||||| |||| |||| ||| |||| | ||| || | || | ||||| || Sbjct 3497 CATACCGTTTTGTAAAGATCGCG-AATTTCTTGCGGGATAGTCTCAATCTTTTGAATTGA 3439 Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311 |||| | | || |||| ||||| || || || ||||||| | | ||| | Sbjct 3438 TCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAG 3379 Query 62312 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62371 | | |||||||| | || || || ||||| || || || | || | | | |||| Sbjct 3378 ATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTA 3319 Query 62372 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62431 | || || || || || | ||| ||||| || || | |||||| || || || || Sbjct 3318 TACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGC 3259 Query 62432 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62491 |||||||| || |||| || | ||| | | ||||| | ||||| || || Sbjct 3258 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTT 3199 Query 62492 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62551 | ||| ||||| || || | ||| | || || || Sbjct 3198 CAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGAT 3139 Query 62552 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62610 || ||||| | | || | ||| | || || ||||| ||||| || | || | | Sbjct 3138 GCCCTTACTCACCGGACTACCCT-CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACT 3080 Query 62611 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62670 |||| || || || | ||| ||| |||| ||||||||||| || | | || || | || Sbjct 3079 CACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTT 3020 Query 62671 GTGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCCGCTAATCCTT 62727 | || ||| ||| || | ||||| |||||| | ||||| || || | ||| | Sbjct 3019 GAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGA---TGAACGCATCGGCCATTCCCT 2963 Query 62728 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGAT 62787 ||||||| |||||||| |||| || | | | || ||| | ||| || || | ||||| Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903 Query 62788 AATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCT 62844 | || || | ||| || || || || ||||| | | || || ||| | | || |||| Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTAT--CTTAG-CGACTTCCT 2846 Query 62845 TCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGCAACAGATG 62901 |||| ||| ||||||| | |||| |||||||||||||||| |||| || | Sbjct 2845 TCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGG 2786 Query 62902 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAG 62959 ||||||| || || ||||| || | | || || ||| | | || || ||||| || Sbjct 2785 CCAGATTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAG 2728 Query 62960 ATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 63019 || ||| || || ||||| | ||| || |||||||| || || || |||||||| Sbjct 2727 GTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTT 2668 Query 63020 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 63079 || || ||| |||| || ||||| | ||| || || || ||||| ||| | | | Sbjct 2667 GTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTC 2608 Query 63080 TCGAGCCTTTAT-TATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTT 63138 | || || | | | || | | | | ||| | ||||| || |||| | Sbjct 2607 CTGTGCTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCT 2549 Query 63139 CGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 63198 ||||||| || ||||| || ||| || ||||| || | |||||||||| || Sbjct 2548 CGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCC 2489 Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258 || | | | ||| ||| || ||||| || ||||| || ||||| ||||| || | Sbjct 2488 ACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACA 2429 Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63318 || | || | || || || || || || || || |||||||| ||| | | | Sbjct 2428 TGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATA 2369 Query 63319 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63378 |||| |||||||||||||| || ||||| | ||||||||| |||||| || |||| Sbjct 2368 CATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCT 2309 Query 63379 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63438 |||| | ||| | || || || || || || | || ||| || | | |||||||| | Sbjct 2308 GATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAA 2249 Query 63439 TACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACC 63496 |||| || || |||||||| || |||| | || || || | | | || || || Sbjct 2248 TACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTT--CAGCCC 2191 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || ||| || || || | || ||| | || | || || || |||||||| Sbjct 2190 AATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTC 2131 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 ||||||||||| |||| | || ||||||||| ||| | || | || || | Sbjct 2130 AATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGC 2071 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 ||| ||| | ||| || || ||||| ||||| | |||||| || ||||| ||||| Sbjct 2070 CGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGT 2011 Query 63677 CTCAATAGCTGAGTCTAT-ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 || || |||| || || | || | || || || | ||||| ||||| | ||| | Sbjct 2010 TTCGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATAT 1952 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 |||| |||| ||||| || || ||||| || | |||||| ||| |||||| |||| Sbjct 1951 GCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTT 1892 Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 |||| || ||||||||||| |||||| || ||||||||||| ||||||| Sbjct 1891 TAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAATTGCCGAGTT 1840 >seq22281 Length=11977 Score = 140 bits (154), Expect = 4e-28 Identities = 188/259 (73%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || ||||||| || ||||| ||||||||||| || ||||| | ||| || ||||| Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || |||||||| ||||| ||||||||||| || ||||| || ||||||||||| Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471 || |||||||| ||||| || || || || || | | | ||| || | || Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGC- 3226 Query 33472 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33526 || || || ||||| ||| | ||||| || |||||||| || || || |||| || Sbjct 3227 CT-TCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCG 3285 Query 33527 TTTCTATGGCATTAAAGAG 33545 |||| ||||||||||| || Sbjct 3286 TTTCGATGGCATTAAACAG 3304 Score = 89.7 bits (98), Expect = 6e-13 Identities = 177/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 33574 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33633 ||||| ||||||| || ||||| || || | |||||| || || ||||| || Sbjct 3419 TAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCATCGCAATCTGGAAC 3478 Query 33634 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTT 33693 ||||||||||| | || || || | |||||| || | ||| |||||| ||| ||| Sbjct 3479 CCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTGGCTAAAGCGTTCCACCAGATTC 3538 Query 33694 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33753 || ||||| || || || || ||||| || || | || || || || | | Sbjct 3539 TCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGGAAATGAAGTGACGT 3598 Query 33754 TCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 33813 ||| ||| | || || ||| || || ||||| || || | ||| || || ||||| Sbjct 3599 TCGCTCGGTTTCAGCGCATCCCAGTCCTTCATATCCTTGGACAGATCAACCTCCTCCACC 3658 Query 33814 GTCCAAAATGATGCCTCTGCCT 33835 ||||| || || ||||| |||| Sbjct 3659 GTCCAGAACGAAGCCTCCGCCT 3680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622710721456040