Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq14204 168 6e-37 seq25975 109 5e-19 seq734 82.4 7e-11 >seq14204 Length=1823 Score = 168 bits (186), Expect = 6e-37 Identities = 222/305 (73%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||||||||| || || ||||| | || |||| ||| | || ||||| || || | Sbjct 432 AAACGCATGACGATCTGTGGAACTCAGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 373 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| || |||||||||||||||||||| || |||||||| || | |||||| Sbjct 372 ACGGCTTCCTGCGGATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAATCGCCCGAGG 313 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| ||| | || ||||| |||||| | |||||||| || || |||||||| | Sbjct 312 AAGCGCTTGAGACAGCCATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGA 253 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTA-GAA 71908 |||| || ||||||||||||||| || ||| |||||||| | | || | || Sbjct 252 ACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGAT-CAGGGTTGGAAGGAG 194 Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968 ||| || | ||||| || ||||| || ||||| | | || || | || || || || Sbjct 193 CGTGAAATCTTTGGAAAGATTCGGTACATGAACTATGACGGATGTAAGCGTAAATTTAAC 134 Query 71969 GTGAA 71973 ||||| Sbjct 133 GTGAA 129 >seq25975 Length=7706 Score = 109 bits (120), Expect = 5e-19 Identities = 291/438 (66%), Gaps = 9/438 (2%) Strand=Plus/Minus Query 147446 GAGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACT 147505 |||||| || || ||||| ||| |||| ||||| || || | || ||| | || Sbjct 3369 GAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGA 3310 Query 147506 AGTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCAT 147565 || | ||||||||||| || ||||| || ||||| || || |||| ||||||||||| Sbjct 3309 CGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCAT 3250 Query 147566 GTAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTC 147625 || | || | |||||||| | |||||| | || |||| | ||| | ||| Sbjct 3249 CGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGA 3190 Query 147626 CCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACA 147685 ||||||||| || ||| ||| | | | ||||||| || |||| | | || Sbjct 3189 CCAGTTCCACAGCTCAGTCG---GCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTT 3133 Query 147686 ACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACT 147745 ||| | || || || ||||| | ||||| | ||| | | || | || | | Sbjct 3132 ACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC-ACAGC 3074 Query 147746 TTGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCC 147803 | | ||| ||||| || |||| || ||||| | || | || || | | | |||| Sbjct 3073 TAG-CTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCC 3015 Query 147804 TCTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACC 147862 || | ||| ||||| || ||| | || | | ||||| ||| || | ||| |||| ||| Sbjct 3014 TCCTCGCTTTCGTACGG-ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACC 2956 Query 147863 GATACCGATGGGTCGGTG 147880 ||||||||||||||||| Sbjct 2955 TATACCGATGGGTCGGTG 2938 >seq734 Length=4884 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | ||||| ||||| | || ||||| | |||||| |||| | || || Sbjct 240 AATATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCA 181 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||| || || ||| | ||||| |||||| || || || || || || || ||| Sbjct 180 TCCGATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGAT 121 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | || || | | ||| || || || ||||||| | | | | |||||| Sbjct 120 CAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTAT 61 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || ||||| || ||||||||||||| Sbjct 60 AACATCCAGAAGGAATCCACCCTCCATCTGGTCCT 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478480693769680