Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq14204 168 6e-37
seq25975 109 5e-19
seq734 82.4 7e-11
>seq14204
Length=1823
Score = 168 bits (186), Expect = 6e-37
Identities = 222/305 (73%), Gaps = 2/305 (1%)
Strand=Plus/Minus
Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729
|||||||||| || || ||||| | || |||| ||| | || ||||| || || |
Sbjct 432 AAACGCATGACGATCTGTGGAACTCAGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 373
Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789
|||| | ||| || |||||||||||||||||||| || |||||||| || | ||||||
Sbjct 372 ACGGCTTCCTGCGGATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAATCGCCCGAGG 313
Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849
| ||||| ||| | || ||||| |||||| | |||||||| || || |||||||| |
Sbjct 312 AAGCGCTTGAGACAGCCATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGA 253
Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTA-GAA 71908
|||| || ||||||||||||||| || ||| |||||||| | | || | ||
Sbjct 252 ACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGAT-CAGGGTTGGAAGGAG 194
Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968
||| || | ||||| || ||||| || ||||| | | || || | || || || ||
Sbjct 193 CGTGAAATCTTTGGAAAGATTCGGTACATGAACTATGACGGATGTAAGCGTAAATTTAAC 134
Query 71969 GTGAA 71973
|||||
Sbjct 133 GTGAA 129
>seq25975
Length=7706
Score = 109 bits (120), Expect = 5e-19
Identities = 291/438 (66%), Gaps = 9/438 (2%)
Strand=Plus/Minus
Query 147446 GAGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACT 147505
|||||| || || ||||| ||| |||| ||||| || || | || ||| | ||
Sbjct 3369 GAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGA 3310
Query 147506 AGTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCAT 147565
|| | ||||||||||| || ||||| || ||||| || || |||| |||||||||||
Sbjct 3309 CGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCAT 3250
Query 147566 GTAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTC 147625
|| | || | |||||||| | |||||| | || |||| | ||| | |||
Sbjct 3249 CGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGA 3190
Query 147626 CCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACA 147685
||||||||| || ||| ||| | | | ||||||| || |||| | | ||
Sbjct 3189 CCAGTTCCACAGCTCAGTCG---GCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTT 3133
Query 147686 ACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACT 147745
||| | || || || ||||| | ||||| | ||| | | || | || | |
Sbjct 3132 ACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC-ACAGC 3074
Query 147746 TTGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCC 147803
| | ||| ||||| || |||| || ||||| | || | || || | | | ||||
Sbjct 3073 TAG-CTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCC 3015
Query 147804 TCTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACC 147862
|| | ||| ||||| || ||| | || | | ||||| ||| || | ||| |||| |||
Sbjct 3014 TCCTCGCTTTCGTACGG-ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACC 2956
Query 147863 GATACCGATGGGTCGGTG 147880
|||||||||||||||||
Sbjct 2955 TATACCGATGGGTCGGTG 2938
>seq734
Length=4884
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | ||||| ||||| | || ||||| | |||||| |||| | || ||
Sbjct 240 AATATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCA 181
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
||| || || ||| | ||||| |||||| || || || || || || || |||
Sbjct 180 TCCGATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGAT 121
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| || | || || | | ||| || || || ||||||| | | | | ||||||
Sbjct 120 CAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTAT 61
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || ||||| || |||||||||||||
Sbjct 60 AACATCCAGAAGGAATCCACCCTCCATCTGGTCCT 26
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478480693769680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |