Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1284 131 4e-25 seq25975 93.3 1e-13 >seq1284 Length=4647 Score = 131 bits (144), Expect = 4e-25 Identities = 242/345 (70%), Gaps = 10/345 (3%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| | || || || ||||| ||||| ||||| ||||||||||| | ||||||| Sbjct 3205 AGGTGACTTGGGCCCTGTGTACGGCTTTCAGTGGCGTCACTTTGGTGCCGCATACAAAA- 3263 Query 111548 CATG-CACGACTCATATGATTCACAGGGAACTGATCAATT-ACAGAATGTCATTGATCAA 111605 |||| |||||| |||| ||| || | ||||| || | ||| || || ||| || Sbjct 3264 CATGTCACGACGATTATGCGGGACAAGGCATAGATCAGTTGGCTGAA-GTGATCGATAAA 3322 Query 111606 ATTAAGAACAACCCAACTTC--TCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663 || ||||| || || ||| |||||| || || ||||| || ||||| || || Sbjct 3323 ATAAAGAATAATCC--TTTCGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCTGATA 3380 Query 111664 TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACGGG 111722 | || ||||| || |||||||| || || | || ||||||| ||| || || Sbjct 3381 TTCCGAACATGGCCCTACCACCATGCCA-CTGCTTGGCACAGTTTTTTGTTGGTGATGGA 3439 Query 111723 ATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAAT 111782 |||||| ||||| |||||||| || || || ||| | ||||| || || || ||||| Sbjct 3440 GAGCTTTCGTGCCAGATGTATCAACGTTCAGCCGATGTAGGTCTGGGCGTGCCTTTTAAC 3499 Query 111783 ATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACA 111827 ||||| |||||| | | || || | | ||||| ||| | ||| Sbjct 3500 ATTGCTAGTTACTCCTTGCTGACCCACATGATCGCGCATGTCACA 3544 >seq25975 Length=7706 Score = 93.3 bits (102), Expect = 1e-13 Identities = 114/154 (74%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 |||||||||| |||||||| || || || ||| ||| | ||||| || ||||||| Sbjct 3482 TTTACAAAACGGTATGGGAGATCTCAGTGAAAACGTGCATCAAAATGGCAGCGGATCGCG 3541 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC--AGCCAACCTCCGC 365105 |||| |||||| |||| || ||||| || |||||| | | | | || | || || Sbjct 3542 GTGCGTTTATCGATCAGTCGCAATCGTTCAA--TATTCACGTCGCGGAACCCAACTACGG 3599 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 ||||| || || || |||||||||||||||||| Sbjct 3600 TAAGCTGACGTCGATCCATTTCTACGGGTGGAAA 3633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302846461448558