Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 131 4e-25
seq25975 93.3 1e-13
>seq1284
Length=4647
Score = 131 bits (144), Expect = 4e-25
Identities = 242/345 (70%), Gaps = 10/345 (3%)
Strand=Plus/Plus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
|||||| | || || || ||||| ||||| ||||| ||||||||||| | |||||||
Sbjct 3205 AGGTGACTTGGGCCCTGTGTACGGCTTTCAGTGGCGTCACTTTGGTGCCGCATACAAAA- 3263
Query 111548 CATG-CACGACTCATATGATTCACAGGGAACTGATCAATT-ACAGAATGTCATTGATCAA 111605
|||| |||||| |||| ||| || | ||||| || | ||| || || ||| ||
Sbjct 3264 CATGTCACGACGATTATGCGGGACAAGGCATAGATCAGTTGGCTGAA-GTGATCGATAAA 3322
Query 111606 ATTAAGAACAACCCAACTTC--TCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663
|| ||||| || || ||| |||||| || || ||||| || ||||| || ||
Sbjct 3323 ATAAAGAATAATCC--TTTCGATCGTCGAATCATCATGAGCGCCTGGAATCCTTCTGATA 3380
Query 111664 TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACGGG 111722
| || ||||| || |||||||| || || | || ||||||| ||| || ||
Sbjct 3381 TTCCGAACATGGCCCTACCACCATGCCA-CTGCTTGGCACAGTTTTTTGTTGGTGATGGA 3439
Query 111723 ATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAAT 111782
|||||| ||||| |||||||| || || || ||| | ||||| || || || |||||
Sbjct 3440 GAGCTTTCGTGCCAGATGTATCAACGTTCAGCCGATGTAGGTCTGGGCGTGCCTTTTAAC 3499
Query 111783 ATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACA 111827
||||| |||||| | | || || | | ||||| ||| | |||
Sbjct 3500 ATTGCTAGTTACTCCTTGCTGACCCACATGATCGCGCATGTCACA 3544
>seq25975
Length=7706
Score = 93.3 bits (102), Expect = 1e-13
Identities = 114/154 (74%), Gaps = 4/154 (3%)
Strand=Plus/Plus
Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047
|||||||||| |||||||| || || || ||| ||| | ||||| || |||||||
Sbjct 3482 TTTACAAAACGGTATGGGAGATCTCAGTGAAAACGTGCATCAAAATGGCAGCGGATCGCG 3541
Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC--AGCCAACCTCCGC 365105
|||| |||||| |||| || ||||| || |||||| | | | | || | || ||
Sbjct 3542 GTGCGTTTATCGATCAGTCGCAATCGTTCAA--TATTCACGTCGCGGAACCCAACTACGG 3599
Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139
||||| || || || ||||||||||||||||||
Sbjct 3600 TAAGCTGACGTCGATCCATTTCTACGGGTGGAAA 3633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302846461448558
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |