Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq25975 315 7e-81 seq29242 122 8e-23 seq734 122 8e-23 seq9735 118 1e-21 seq3879 111 1e-19 seq22281 102 8e-17 >seq25975 Length=7706 Score = 315 bits (348), Expect = 7e-81 Identities = 1192/1838 (65%), Gaps = 48/1838 (3%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || ||||||||||||||||| |||||||| ||||| | ||| ||| |||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | | |||| |||| ||||| || | ||| | |||||| Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918 ||||| || || || ||| || || ||||| | || |||||| || | || || Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGC-ACGTTTTCACTGAGATCTC 3499 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGA 144978 ||| | || ||||| | | ||| | | ||| || |||||| ||||| || Sbjct 3498 CCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATTGA 3439 Query 144979 CCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCAA 145038 || |||| || | || ||||| ||| ||| | | | | ||| ||| Sbjct 3438 TCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAG 3379 Query 145039 GTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATA 145098 || | | | | || || || ||||||||||| || | | ||| || | || Sbjct 3378 ATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTA 3319 Query 145099 CACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGC 145158 ||||| |||||| |||| || || || || || ||||| || ||||| || |||| || Sbjct 3318 TACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGC 3259 Query 145159 GGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTT 145218 || ||||| |||| || | |||||||| | |||||||| || | |||||| Sbjct 3258 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTT 3199 Query 145219 TAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAAT 145278 | | ||| | ||| ||| ||||||| | || |||||| |||||||||| || Sbjct 3198 CAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGAT 3139 Query 145279 GCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCC--CAAGTTTTGGCGAGC 145336 ||||| || | || || || | | | ||| | | || || | ||| | | Sbjct 3138 GCCCTTACTCACCGGACTACCCTCGTACGTTTCGTA-CGGTCCATCACGAGC-GGCCAAC 3081 Query 145337 TCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGC 145396 || || || || ||||| || |||||||| || || ||| ||||| ||| ||| Sbjct 3080 TCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTT 3021 Query 145397 ATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGT 145456 || || ||||| |||||||| ||||| | | || |||||||| | ||||| Sbjct 3020 TGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGA 2961 Query 145457 ATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA- 145515 | || | |||||||| || || ||||||| | | ||| | || |||||| Sbjct 2960 ACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAG 2901 Query 145516 TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA 145575 | | | || || || || || |||| || ||| ||||| ||| | | | | || Sbjct 2900 TAGTTGACA-TCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAG 2842 Query 145576 CTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGC 145635 ||| ||| ||| || || | || | ||| | || | || ||||| || Sbjct 2841 CTTGGTAAAATCATACGTTTTATCTTGCTTTACAA-ACA--TGTTCAAAGCAATCGAGGC 2785 Query 145636 CAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGT--ACGATCTCGGCGCACAAA 145693 || ||| || || || || || | ||| | || | || || |||| ||||| Sbjct 2784 CAGATTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAGG 2727 Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753 ||| |||||| |||||||| | ||| |||||||||||||| | ||||| || |||||| Sbjct 2726 TTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTG 2667 Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGT 145811 || |||||||| ||| |||| || |||||||||| ||| | ||| ||| ||||| Sbjct 2666 TACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAAC--CACAAGT 2609 Query 145812 CCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCT 145871 |||| || ||||| | |||| ||||||| ||||| | |||| |||| || Sbjct 2608 CCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCT 2549 Query 145872 CAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACC 145931 | ||| | ||| | ||| | ||| |||||||| | || ||||||||||| || Sbjct 2548 CGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCC 2489 Query 145932 ATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCA 145991 | | | || || | || |||| ||| |||| ||| || | |||||| ||||| | || Sbjct 2488 ACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACA 2429 Query 145992 AGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT---AT 146048 |||||| || | || || || ||||| ||| | || || | ||| || Sbjct 2428 TGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAG-AAACTCGAAT 2370 Query 146049 AGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTC----CTTTTCGTTTGCCA 146104 | | || | ||||||||||| | ||||| ||||| |||| | ||| | ||||| Sbjct 2369 ACA--TCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG-TTGCCG 2313 Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164 ||||| ||||||| ||| || | ||||| | ||||||| ||| ||| | | ||| | Sbjct 2312 CCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTT 2253 Query 146165 GCTACGCCGTTCGT---AGAG-TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATT 146220 | | ||||| || ||| | ||| || || | ||| | ||| || || || Sbjct 2252 GAAATACCGTTTGTGCCGGAGATGTAT----GTTCCCTTCGCGCGGATGCAGTGCACGTT 2197 Query 146221 CACGCCGAGACCGCCGCCGTACTTGGATAT-AGCGGCGCAGTCGCCGAGCGTCTCGTAGA 146279 || || | || ||| | |||| || || ||| || || | || || ||||| | Sbjct 2196 CAGCCCAATGCCACCGGCCGACTTTGAAATCAGC-GCACATTGCTTCAGAGTATCGTAAA 2138 Query 146280 TGCCGTCAATGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATC 146338 | || ||||||||||| | || ||| |||||||| || || | | ||| | | | Sbjct 2137 TACCCTCAATGCTATC-ATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGC 2079 Query 146339 GGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCAT 146397 |||| |||| | |||| ||||| ||||| ||||| | ||| | || || Sbjct 2078 TGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAG-ACAGCAG 2020 Query 146398 CCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCAT 146457 |||||||||||| || | | |||| || || || ||||| | |||||||||||| Sbjct 2019 ATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCAT 1960 Query 146458 GAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAA--ATAGCCGTTC 146515 ||||| || || || ||||| | | || | | ||||| | ||| || ||| Sbjct 1959 CAGCATATGCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGT-- 1902 Query 146516 TCCAGGGTTTTGTATCCGAAAAATTTGTACGTATAGTC 146553 |||| ||||| | |||||| | |||||| | |||| Sbjct 1901 TCCAATGTTTTAAAGCCGAAATAGTTGTACCCAAAGTC 1864 >seq29242 Length=5648 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | ||| | ||| || ||||| |||||||| || || | Sbjct 5416 CCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGAC 5475 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || || |||| | ||||||||| || || ||| Sbjct 5476 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 5535 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || || || ||||| | ||| | ||||||| | ||| | Sbjct 5536 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACC 5595 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || ||||| || ||||||||||| Sbjct 5596 TCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq734 Length=4884 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| || ||||| || ||||| || || | Sbjct 11 CCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGAC 70 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || || |||| | ||||||||| || || ||| Sbjct 71 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 130 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || || || ||||| | ||| | ||||||| | ||| | Sbjct 131 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACC 190 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| |||||||| || ||||||||||| Sbjct 191 TCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237 >seq9735 Length=15595 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | |||||| ||||| ||||| ||||| ||| Sbjct 4836 CCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAG 4777 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||||||||| || ||||| Sbjct 4776 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGA 4717 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | ||| | || || | | ||||| Sbjct 4716 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 4657 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| || ||||| ||||||||||||||| Sbjct 4656 TCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609 >seq3879 Length=3897 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 131029 AAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGC 131088 || || | |||||||||||| || |||||||||||| || || || ||||| ||| Sbjct 3896 AAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGC 3837 Query 131089 TGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATT 131148 ||||| || ||| |||| ||||||||||| || ||||| || || || ||||| ||| Sbjct 3836 TGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATC 3777 Query 131149 TTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCG 131208 || ||| | | ||| | || || | | ||||| || | || | ||| || || Sbjct 3776 TTGGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCA 3717 Query 131209 GTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| ||||| |||||||| Sbjct 3716 GTCAGCGTTTTCACGAAGATCTGCAT 3691 >seq22281 Length=11977 Score = 102 bits (112), Expect = 8e-17 Identities = 276/422 (65%), Gaps = 3/422 (1%) Strand=Plus/Minus Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAG 46122 ||| ||||||| | ||| ||||||||||| ||||| | ||||||||| | || Sbjct 3304 CTGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAAC 3245 Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182 |||||| ||||| | || | |||| |||||| | ||||| || || || || Sbjct 3244 TGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAA 3185 Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATG 46242 || |||| || ||||| || || |||| || | |||| | ||| | ||| Sbjct 3184 GGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATG 3125 Query 46243 CCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTT 46302 || || || || || ||||||||||| ||||||||||| || ||||| ||||| Sbjct 3124 CCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTTC 3065 Query 46303 GCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGC 46362 || || || | || || |||| | |||| || || |||| | | Sbjct 3064 GCCTGCCTGATGTTCAAGTATCTGGTGC---AGAAGCCGTCGAAGGAGCGCGTGACGGAC 3008 Query 46363 ATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC 46422 || | || ||||| | || ||| ||||||| || ||| |||||||||| || | Sbjct 3007 ATTATTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGTTGAC 2948 Query 46423 CTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTG 46482 |||| ||||||||| | |||| | |||||||||||||| || || || || Sbjct 2947 ATGCTTGGCATGAACTGCGATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGTTTG 2888 Query 46483 CT 46484 || Sbjct 2887 CT 2886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471833618040960