Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq25429 170 1e-37
seq24704 96.9 2e-15
seq9735 95.1 8e-15
>seq25429
Length=8147
Score = 170 bits (188), Expect = 1e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||| ||| ||||||| ||||| ||||| | ||| |||||||| ||||| |||||
Sbjct 6046 ATGGCTACCGTGAACGTGAATCGCAATGTTACCGACATCTTCTACCGTTACAAGATGCCC 5987
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
|||||| || ||||| ||||||||||||||||| || || || || || || ||||||
Sbjct 5986 CGCATCAATGCAAAGGTAGAGGGTAAGGGAAACGGCATCAAGACAGTGATCGTGAACATG 5927
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
| ||||| || ||| |||| || ||||||||||| ||||| || || || || |||
Sbjct 5926 GCAGAAGTGGCCCGTGCGATCGGTCGTCCTGCCACCTATCCGACCAAGTACTTTGGCTGC 5867
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
|||||||| ||||| ||||| ||||| || ||
Sbjct 5866 GAACTTGGAGCTCAAACGCAATTTGACCATAA 5835
Score = 138 bits (152), Expect = 8e-28
Identities = 205/288 (71%), Gaps = 6/288 (2%)
Strand=Plus/Minus
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||| |||||||| || || |||||||| | | ||||||||||||||| | || ||
Sbjct 5753 AACGAACGCTTCATTGTGAATGGATCGCACGATGCGGCCAAGCTGCAGGACCTGCTCGAT 5694
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494
||||| || || | || |||||||| | ||| || || ||||||||||| || || ||
Sbjct 5693 GGCTTCATCCGTAGGTACGTGCTGTGCCCGGAGTGTGACAACCCGGAGACGGATCTGATC 5634
Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554
||||| |||||| || ||||| ||||| ||||| |||||||| | |||||| |
Sbjct 5633 GTGTCGTCCAAGAAGGGTACTATCTCGCAGGGTTGCAAGGCGTGCGGATTCCATGGTCCG 5574
Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC--ACCTAAAGAC- 6611
|| || | || || | ||||| ||||| | || ||||| || || | || |
Sbjct 5573 CTCGAGGTGAACCATAAGGTGAACACGTTCATCATCAAAAATCCACCCAACGTGAACCCG 5514
Query 6612 CCTAGCACGCAGGGTTCTTCGCAAAATAAGAGCAACCGTGGCAAGCGC 6659
||||| |||||| | || | | || |||| ||| ||||||||
Sbjct 5513 GCTAGC---CAGGGTGCGTCCCTGACCGAGGGCAAGCGTAGCAAGCGC 5469
>seq24704
Length=53625
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || ||| | ||||| |||||| || ||| || || || ||||| || ||
Sbjct 37704 ACCACCGCGCAGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGA 37645
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| ||| | || || | || || ||||| || || || || || ||||| | ||
Sbjct 37644 CAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGG 37585
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| || || |||||| || || ||||||||||| || ||||| || ||
Sbjct 37584 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 37525
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | ||||| || |||||||| | |||||| ||||| |||||||| ||
Sbjct 37524 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 37474
>seq9735
Length=15595
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | |||| |||| |||||| || ||||| ||||||||||| || ||
Sbjct 4837 ACCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGA 4778
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| | || | || || | || || |||||||| || || || || ||||| | ||
Sbjct 4777 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGG 4718
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| |||||| || ||| || || ||||||||||| || || || | || ||
Sbjct 4717 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 4658
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| | ||| || || || || || | ||||||||||| ||||||||||||
Sbjct 4657 CTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTTT 4606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334823228609639
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |