Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq14204 149 5e-31
seq9735 113 4e-20
>seq14204
Length=1823
Score = 149 bits (164), Expect = 5e-31
Identities = 226/311 (73%), Gaps = 12/311 (4%)
Strand=Plus/Plus
Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038
|| ||||||||| ||||||||||| || | |||||||| |||| || | ||||| ||
Sbjct 128 ATTCACGTTAAATTTACGCTTACATCCGTCATAGTTCATGTACCGAATCTTTCCAAAGAT 187
Query 51039 TTTGCG-TTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACA 51096
|| || | ||| ||| |||| ||||| | ||| || |||||||| ||||| ||
Sbjct 188 TTCACGCTCCTTCCAAC--CCTGATCGTGAATGCCGGCGATCGACCACATGCAACCGACG 245
Query 51097 TAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCC 51156
|| ||| |||||||| ||||||| ||||| ||||||| ||| | ||||| | | |
Sbjct 246 TACCCGTTCGGATCGCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATGGC-TGTCTC 304
Query 51157 AATGCCATGTCT-GCACTA-GGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCA 51214
|| || | || | | | |||||| |||| || || |||||||||||||| ||||
Sbjct 305 AA-GCGCTTCCTCGGGCGATTTCGTCCACTCCAGGATCTTTTTGGCCCAGTACATCCGCA 363
Query 51215 TGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTC 51272
| | ||||||||||||||||| || | | |||| || || |||||||||| ||
Sbjct 364 GGAAGCCGTGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGGGCTGAGTTCCACAGATC 421
Query 51273 GTCGTGAGTTT 51283
||| || ||||
Sbjct 422 GTCATGCGTTT 432
>seq9735
Length=15595
Score = 113 bits (124), Expect = 4e-20
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
|| ||| ||||| || || || || || | ||||| || |||||||| | || || |
Sbjct 4602 ACAGAAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCG 4661
Query 25051 AGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
|| | || ||||| |||||| ||||| || ||| || || ||||| ||||| |
Sbjct 4662 AGCCTTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTC 4721
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
| || || ||||| | || ||||||||||| || | || |||| ||||||| | ||
Sbjct 4722 CAGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCG 4781
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||||||||| || ||||| || || ||| | || ||
Sbjct 4782 ACTACAATATTCAGAAGGAATCGACCCTTCATCTGGTCCT 4821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433167615692735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |