Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq14204 149 5e-31 seq9735 113 4e-20 >seq14204 Length=1823 Score = 149 bits (164), Expect = 5e-31 Identities = 226/311 (73%), Gaps = 12/311 (4%) Strand=Plus/Plus Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038 || ||||||||| ||||||||||| || | |||||||| |||| || | ||||| || Sbjct 128 ATTCACGTTAAATTTACGCTTACATCCGTCATAGTTCATGTACCGAATCTTTCCAAAGAT 187 Query 51039 TTTGCG-TTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACA 51096 || || | ||| ||| |||| ||||| | ||| || |||||||| ||||| || Sbjct 188 TTCACGCTCCTTCCAAC--CCTGATCGTGAATGCCGGCGATCGACCACATGCAACCGACG 245 Query 51097 TAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCC 51156 || ||| |||||||| ||||||| ||||| ||||||| ||| | ||||| | | | Sbjct 246 TACCCGTTCGGATCGCGCCCATCCAGACTGTAGCGATCGTTCAGATAGATGGC-TGTCTC 304 Query 51157 AATGCCATGTCT-GCACTA-GGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCA 51214 || || | || | | | |||||| |||| || || |||||||||||||| |||| Sbjct 305 AA-GCGCTTCCTCGGGCGATTTCGTCCACTCCAGGATCTTTTTGGCCCAGTACATCCGCA 363 Query 51215 TGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTC 51272 | | ||||||||||||||||| || | | |||| || || |||||||||| || Sbjct 364 GGAAGCCGTGCATCTTGCCCTCCTTCACC--ATCTGCAGCTGGGCTGAGTTCCACAGATC 421 Query 51273 GTCGTGAGTTT 51283 ||| || |||| Sbjct 422 GTCATGCGTTT 432 >seq9735 Length=15595 Score = 113 bits (124), Expect = 4e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050 || ||| ||||| || || || || || | ||||| || |||||||| | || || | Sbjct 4602 ACAGAAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCG 4661 Query 25051 AGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110 || | || ||||| |||||| ||||| || ||| || || ||||| ||||| | Sbjct 4662 AGCCTTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTC 4721 Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170 | || || ||||| | || ||||||||||| || | || |||| ||||||| | || Sbjct 4722 CAGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCG 4781 Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||||||||| || ||||| || || ||| | || || Sbjct 4782 ACTACAATATTCAGAAGGAATCGACCCTTCATCTGGTCCT 4821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433167615692735