Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq25975 306 3e-78 seq9735 122 7e-23 seq24704 114 1e-20 seq734 96.9 3e-15 >seq25975 Length=7706 Score = 306 bits (338), Expect = 3e-78 Identities = 1056/1630 (65%), Gaps = 34/1630 (2%) Strand=Plus/Minus Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838 |||||||| ||||| | || || | | |||||||||||||||||||| |||||||| Sbjct 3707 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCA 3648 Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898 ||||||||||| ||||||| || | || |||| |||| | ||||| ||||| Sbjct 3647 GTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTGGGT 3588 Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958 | | |||||| || ||||| ||||| ||||| | |||||||| || ||| Sbjct 3587 TCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCC 3528 Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018 || || | |||||||| || ||||| |||||||||||||| || | | | | Sbjct 3527 ATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATTTCT 3468 Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078 | || || ||||| || || | || ||||| | | ||| | ||| ||| Sbjct 3467 TGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTCATA 3408 Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138 | | | || || ||| ||| ||| | | | | ||||| || ||| Sbjct 3407 TCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACCTGA 3348 Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198 || ||||||| | ||||| | | ||| | ||| ||| | ||||| ||||||||| Sbjct 3347 AACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATTCA 3288 Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTTT 129258 |||||||| | ||||| || || | || || ||||| |||| ||||| || Sbjct 3287 TTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTG 3228 Query 129259 CGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGGT 129318 || | |||||||| || | || || || | | ||||| ||||| | || || Sbjct 3227 CGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGC 3168 Query 129319 GTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGGAA 129378 | ||||||| ||||| |||| || ||| ||| | ||||| ||| | Sbjct 3167 TCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTCGTACGTT 3108 Query 129379 TCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAATT 129438 |||| | || | | ||||| || || || ||||||| ||| || ||||| || Sbjct 3107 TCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATG 3048 Query 129439 GTTTCGGCAATTTTGGT--GTTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATA-CGC 129495 |||||| ||| || || ||||| | || |||| |||||||||||||| ||| ||| Sbjct 3047 GTTTCG--AATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG-ATAGCGC 2991 Query 129496 AACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTA 129555 | | | || | ||||||| || |||| ||| | |||||||||||| || | Sbjct 2990 ATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATG 2931 Query 129556 TTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTC 129615 ||||| | ||| | | ||||||||||||| || || || ||||| | ||| Sbjct 2930 TTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTG 2871 Query 129616 TTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATG 129675 || || || | || | || | | | ||||| ||| | ||| Sbjct 2870 CGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATAC---GTTTTATCTTGC 2814 Query 129676 TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCA 129735 | ||||| || | | ||||||||||| |||||| || || ||||| || Sbjct 2813 TTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGAC 2754 Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795 ||||| |||||||||| ||||| || | ||||||||| || | || || ||| Sbjct 2753 GAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGA 2694 Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855 |||||||| ||||| ||||| ||||||| |||||| || ||||||||| || ||| Sbjct 2693 TTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGC 2634 Query 129856 GTTTCGACAATGGTCCTGA---ACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCA 129912 | ||| ||| || || ||||||| | || |||| ||||| | ||| || Sbjct 2633 GACTCG---ATGATCGCGAACCACAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCC 2577 Query 129913 CATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCA-A 129971 ||||||||| || ||||| | || || ||| || || || || || | Sbjct 2576 TCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACC--CCAC-GTATCTGCCAGA 2520 Query 129972 C--GGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATA 130029 | || | || | |||||||||| ||||||||| ||| ||| || || || ||||| Sbjct 2519 CCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATG 2460 Query 130030 AACAAATCGGGTACCCACAGGGCGTACAACAAATCTCG----CGCTTTTCTATCCTCGGC 130085 |||| ||| |||| |||||| ||||| |||| || || || ||| |||| | Sbjct 2459 AACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCT-TCCTTG-- 2403 Query 130086 ACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATA 130145 || |||| || || || || || ||| | | || | ||||||||||| | ||| Sbjct 2402 -CCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATA 2344 Query 130146 AATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTT 130202 || || | ||| || || | ||||| || || || |||| || | | |||||| Sbjct 2343 GATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTT 2284 Query 130203 GTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACT 130262 ||| || |||| ||| | | |||||||||| | | |||||||||| ||| | | Sbjct 2283 GTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGT 2224 Query 130263 GCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAA 130322 || || || | | || ||| | || || ||||| ||| | | ||||| |||| Sbjct 2223 TCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAG 2164 Query 130323 CGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGA 130381 ||| | || || | || || || ||||| || | || || || || ||| | || | Sbjct 2163 CGCAC-ATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCA 2105 Query 130382 GGAAACACGA 130391 | ||||| || Sbjct 2104 GAAAACAGGA 2095 >seq9735 Length=15595 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| ||||| || ||||| | ||||| || || |||| ||||| || || | Sbjct 4606 AAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 4665 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | || || | || || || || || ||||| || ||||| || || Sbjct 4666 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGA 4725 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||||| || ||||||||||| ||| | |||||| ||||| ||||||| || Sbjct 4726 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 4785 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| ||||| || ||||| ||| | ||| | || ||||| | || || ||| Sbjct 4786 CAATATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCGACTTCGTGGTGGT 4837 >seq24704 Length=53625 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| || | || ||||| || || || Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || ||||||||||| || || || ||| Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGAT 37593 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || ||||| || ||| | |||||| ||||| | ||||| ||| Sbjct 37594 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTAC 37653 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || ||||| || ||| | ||| | || | || ||||||| ||| Sbjct 37654 AACATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGGT 37704 >seq734 Length=4884 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| ||||| ||||| || || ||| |||||||||| ||| | Sbjct 2845 AGATGCAGATCTTTGTAAAAACGTTAACTGGAAAGACGATCACTCTTGAGGTGATCGCGT 2786 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || ||| || || ||| | ||||| || | || || ||| | || |||| Sbjct 2785 CGGAAACGGTGTTGGACATTAAAAACAAAATAGAACAACGTGAAGGAATTGCCCCGGATC 2726 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || |||| |||||||| || ||| | || ||| || | | |||||||||||| Sbjct 2725 AGCAGCGAATTATCTTTGCCGGTAAGCAGCTGGATGATGGTCGGATCATCTCCGATTACA 2666 Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422 | || ||| | | ||| || || ||| Sbjct 2665 ATATCCAACATGGATCGACGATGCAT 2640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419572649354485