Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 306 3e-78
seq9735 122 7e-23
seq24704 114 1e-20
seq734 96.9 3e-15
>seq25975
Length=7706
Score = 306 bits (338), Expect = 3e-78
Identities = 1056/1630 (65%), Gaps = 34/1630 (2%)
Strand=Plus/Minus
Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838
|||||||| ||||| | || || | | |||||||||||||||||||| ||||||||
Sbjct 3707 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCA 3648
Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898
||||||||||| ||||||| || | || |||| |||| | ||||| |||||
Sbjct 3647 GTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTGGGT 3588
Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958
| | |||||| || ||||| ||||| ||||| | |||||||| || |||
Sbjct 3587 TCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCC 3528
Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018
|| || | |||||||| || ||||| |||||||||||||| || | | | |
Sbjct 3527 ATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATTTCT 3468
Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078
| || || ||||| || || | || ||||| | | ||| | ||| |||
Sbjct 3467 TGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTCATA 3408
Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138
| | | || || ||| ||| ||| | | | | ||||| || |||
Sbjct 3407 TCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACCTGA 3348
Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198
|| ||||||| | ||||| | | ||| | ||| ||| | ||||| |||||||||
Sbjct 3347 AACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATTCA 3288
Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTTT 129258
|||||||| | ||||| || || | || || ||||| |||| ||||| ||
Sbjct 3287 TTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTG 3228
Query 129259 CGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGGT 129318
|| | |||||||| || | || || || | | ||||| ||||| | || ||
Sbjct 3227 CGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGC 3168
Query 129319 GTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGGAA 129378
| ||||||| ||||| |||| || ||| ||| | ||||| ||| |
Sbjct 3167 TCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTCGTACGTT 3108
Query 129379 TCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAATT 129438
|||| | || | | ||||| || || || ||||||| ||| || ||||| ||
Sbjct 3107 TCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATG 3048
Query 129439 GTTTCGGCAATTTTGGT--GTTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATA-CGC 129495
|||||| ||| || || ||||| | || |||| |||||||||||||| ||| |||
Sbjct 3047 GTTTCG--AATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG-ATAGCGC 2991
Query 129496 AACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTA 129555
| | | || | ||||||| || |||| ||| | |||||||||||| || |
Sbjct 2990 ATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATG 2931
Query 129556 TTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTC 129615
||||| | ||| | | ||||||||||||| || || || ||||| | |||
Sbjct 2930 TTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTG 2871
Query 129616 TTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATG 129675
|| || || | || | || | | | ||||| ||| | |||
Sbjct 2870 CGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATAC---GTTTTATCTTGC 2814
Query 129676 TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCA 129735
| ||||| || | | ||||||||||| |||||| || || ||||| ||
Sbjct 2813 TTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGAC 2754
Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795
||||| |||||||||| ||||| || | ||||||||| || | || || |||
Sbjct 2753 GAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGA 2694
Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855
|||||||| ||||| ||||| ||||||| |||||| || ||||||||| || |||
Sbjct 2693 TTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGC 2634
Query 129856 GTTTCGACAATGGTCCTGA---ACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCA 129912
| ||| ||| || || ||||||| | || |||| ||||| | ||| ||
Sbjct 2633 GACTCG---ATGATCGCGAACCACAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCC 2577
Query 129913 CATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCA-A 129971
||||||||| || ||||| | || || ||| || || || || || |
Sbjct 2576 TCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACC--CCAC-GTATCTGCCAGA 2520
Query 129972 C--GGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATA 130029
| || | || | |||||||||| ||||||||| ||| ||| || || || |||||
Sbjct 2519 CCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATG 2460
Query 130030 AACAAATCGGGTACCCACAGGGCGTACAACAAATCTCG----CGCTTTTCTATCCTCGGC 130085
|||| ||| |||| |||||| ||||| |||| || || || ||| |||| |
Sbjct 2459 AACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCT-TCCTTG-- 2403
Query 130086 ACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATA 130145
|| |||| || || || || || ||| | | || | ||||||||||| | |||
Sbjct 2402 -CCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATA 2344
Query 130146 AATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTT 130202
|| || | ||| || || | ||||| || || || |||| || | | ||||||
Sbjct 2343 GATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTT 2284
Query 130203 GTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACT 130262
||| || |||| ||| | | |||||||||| | | |||||||||| ||| | |
Sbjct 2283 GTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGT 2224
Query 130263 GCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAA 130322
|| || || | | || ||| | || || ||||| ||| | | ||||| ||||
Sbjct 2223 TCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAG 2164
Query 130323 CGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGA 130381
||| | || || | || || || ||||| || | || || || || ||| | || |
Sbjct 2163 CGCAC-ATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCA 2105
Query 130382 GGAAACACGA 130391
| ||||| ||
Sbjct 2104 GAAAACAGGA 2095
>seq9735
Length=15595
Score = 122 bits (134), Expect = 7e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| ||||| || ||||| | ||||| || || |||| ||||| || || |
Sbjct 4606 AAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 4665
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | || || | || || || || || ||||| || ||||| || ||
Sbjct 4666 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGA 4725
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| || ||||| || ||||||||||| ||| | |||||| ||||| ||||||| ||
Sbjct 4726 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 4785
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| ||||| || ||||| ||| | ||| | || ||||| | || || |||
Sbjct 4786 CAATATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCGACTTCGTGGTGGT 4837
>seq24704
Length=53625
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| | || ||||| || | || ||||| || || ||
Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || || || ||||||||||| || || || |||
Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGAT 37593
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || ||||| || ||| | |||||| ||||| | ||||| |||
Sbjct 37594 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTAC 37653
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || ||||| || ||| | ||| | || | || ||||||| |||
Sbjct 37654 AACATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGGT 37704
>seq734
Length=4884
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| ||||| ||||| || || ||| |||||||||| ||| |
Sbjct 2845 AGATGCAGATCTTTGTAAAAACGTTAACTGGAAAGACGATCACTCTTGAGGTGATCGCGT 2786
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || ||| || || ||| | ||||| || | || || ||| | || ||||
Sbjct 2785 CGGAAACGGTGTTGGACATTAAAAACAAAATAGAACAACGTGAAGGAATTGCCCCGGATC 2726
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || || |||| |||||||| || ||| | || ||| || | | ||||||||||||
Sbjct 2725 AGCAGCGAATTATCTTTGCCGGTAAGCAGCTGGATGATGGTCGGATCATCTCCGATTACA 2666
Query 22397 ACATTCAAAAAGAATCCACCATACAT 22422
| || ||| | | ||| || || |||
Sbjct 2665 ATATCCAACATGGATCGACGATGCAT 2640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419572649354485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |