Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq28971 174 3e-38 seq24704 149 1e-30 seq9735 134 3e-26 seq734 134 3e-26 >seq28971 Length=24202 Score = 174 bits (192), Expect = 3e-38 Identities = 361/535 (67%), Gaps = 2/535 (0%) Strand=Plus/Minus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 ||||||||| ||||| ||||| ||| || |||||||| ||||| | ||| | || || Sbjct 2698 CCACATTGCCTCGACGTAGTCTTTCGCGTGCCCCCAATCACGCTTCGAGTCTAGATTGCC 2639 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377 || |||| | | ||||| ||||||| | ||| | ||| || ||||| || Sbjct 2638 CAGCTCCAGGTACTCCTGCTGGCCGAGCGAAATCTTTGCCACCGAGCGGGTAATTTTGCG 2579 Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437 || ||||| |||| || || | || ||| |||||||| |||||||| ||||| || Sbjct 2578 CGTGACGAAATTCTCTCCCCGGCGTGGTGACTCATGGTTGAACAGGATGCCATTGCAGGC 2519 Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497 |||||| || ||||| || ||||| | || |||| || | ||||||| ||| Sbjct 2518 GAACATATTGTACGCCTCGCGATAGTTTATCACAATCCAATACCCGTACATCTTGGCACA 2459 Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557 |||||||| || || |||| ||| || ||| | || || || | || || || Sbjct 2458 CGCGTACGGTGAGCGAGGATAGAACGGAGTCTTCTCGTTCTGGGGCGTCTCCGCCACCTT 2399 Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617 || | | || || || ||||| |||||||| ||| ||||| | || | | Sbjct 2398 TCCGTACAATTCTGACGTGGATGCCTGGTAGAAGCGGACTGTCTTTTCCTGGCCAACGGT 2339 Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677 || || || || ||||| || || || || | ||||||| || || ||||| || Sbjct 2338 ACGAATGGCATCAAGCAACCGCAGCGTGCCGACCGCATCCACCTCAGCCGTATATTCGCT 2279 Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTT 268737 || ||||| || | || ||||||||||||||| |||| ||||| | || ||| Sbjct 2278 CAGATCGAACGAAATCTTCACATGGCTCTGGGCGGCCAGATTATATATTTCGGACGGGCG 2219 Query 268738 GACCTGCTGCACGATCTTCACGAGGTTCGTTG-AGTCGGTGAGGTCTCCGTAGTG 268791 ||||| | ||| ||||| | || || || ||||| | ||| |||||||| Sbjct 2218 CACCTGGGCAATGATTTTCACCA-GTGCGCTGCTATCGGTCATGTCACCGTAGTG 2165 >seq24704 Length=53625 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| || || || |||||||| |||||||| || ||||| Sbjct 37703 CCACCGCGCAGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAC 37644 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || || || || || Sbjct 37643 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 37584 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| || || | | || || Sbjct 37583 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 37524 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || ||||||||||| |||||||| |||||||| Sbjct 37523 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477 >seq9735 Length=15595 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| |||| || || || || || || || || || || |||||| Sbjct 4836 CCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAG 4777 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | || || || || ||| Sbjct 4776 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGA 4717 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||| || |||||| ||||| | | || || Sbjct 4716 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 4657 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||| || || ||||| |||||||| Sbjct 4656 TCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610 >seq734 Length=4884 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || ||||| || || ||||||||||| || || Sbjct 11 CCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGAC 70 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| ||||| || || || | || || || ||||| Sbjct 71 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 130 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| |||||||| ||| || || || | || || || Sbjct 131 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACC 190 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| || || || || || || |||||||| Sbjct 191 TCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921272540616680