Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq2425 96.9 9e-17
>seq2425
Length=19383
Score = 96.9 bits (106), Expect = 9e-17
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|| ||| ||| |||||||| | | | || ||||| || ||||| |||||||| ||
Sbjct 2130 CCGATGGCGCGCGTCTTTCCGAAAGTGACCAAGTGTACCTTCCACAAGTACGGTCCGTCT 2071
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| || | || | || || || ||| | || ||| ||| | || |||||||||
Sbjct 2070 GGCAGTGTGCAGAAGTTTGACGGTCTGTGCGTGCTACCGCTAAACATCGTGAACGAGAAG 2011
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATCATCAGCGG--TATCGTTG 3511
|||||| | ||||| |||||||||||| | |||| ||||| | | ||| | ||| ||
Sbjct 2010 ATCTACGTGTTCCTGTGGTTCTGGTTCATCCTGCTCACCATCTTGACCGGCATCTCGCTG 1951
Query 3512 TTCTGTACCGCATTGC 3527
| |||||||| ||||
Sbjct 1950 T--TGTACCGCTTTGC 1937
Score = 82.4 bits (90), Expect = 2e-12
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 2709 CATCGACAATGTATTCTTCCGGTTGCATTACCAGTTCACCGTGATCATCCTCATCGCGTT 2768
|||||||||| ||||| || |||||||| | ||||||||||| || ||||||||
Sbjct 2752 CATCGACAATAACATCTTCAGGCTGCATTACAAAGCGACCGTGATCATACTGATCGCGTT 2693
Query 2769 TTCATTGCTGGTGACTTCGCGGCAGTACTTCGG 2801
||| ||||||| || ||||| |||||| ||||
Sbjct 2692 TTCGCTGCTGGTCACCTCGCGACAGTACATCGG 2660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12475854631500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |