Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq2425 96.9 9e-17 >seq2425 Length=19383 Score = 96.9 bits (106), Expect = 9e-17 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | | | || ||||| || ||||| |||||||| || Sbjct 2130 CCGATGGCGCGCGTCTTTCCGAAAGTGACCAAGTGTACCTTCCACAAGTACGGTCCGTCT 2071 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||| || | || | || || || ||| | || ||| ||| | || ||||||||| Sbjct 2070 GGCAGTGTGCAGAAGTTTGACGGTCTGTGCGTGCTACCGCTAAACATCGTGAACGAGAAG 2011 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATCATCAGCGG--TATCGTTG 3511 |||||| | ||||| |||||||||||| | |||| ||||| | | ||| | ||| || Sbjct 2010 ATCTACGTGTTCCTGTGGTTCTGGTTCATCCTGCTCACCATCTTGACCGGCATCTCGCTG 1951 Query 3512 TTCTGTACCGCATTGC 3527 | |||||||| |||| Sbjct 1950 T--TGTACCGCTTTGC 1937 Score = 82.4 bits (90), Expect = 2e-12 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 2709 CATCGACAATGTATTCTTCCGGTTGCATTACCAGTTCACCGTGATCATCCTCATCGCGTT 2768 |||||||||| ||||| || |||||||| | ||||||||||| || |||||||| Sbjct 2752 CATCGACAATAACATCTTCAGGCTGCATTACAAAGCGACCGTGATCATACTGATCGCGTT 2693 Query 2769 TTCATTGCTGGTGACTTCGCGGCAGTACTTCGG 2801 ||| ||||||| || ||||| |||||| |||| Sbjct 2692 TTCGCTGCTGGTCACCTCGCGACAGTACATCGG 2660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12475854631500