Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq22281 235 1e-56 seq25975 197 3e-45 >seq22281 Length=11977 Score = 235 bits (260), Expect = 1e-56 Identities = 316/437 (72%), Gaps = 7/437 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 ||||| || ||||| || ||| |||| ||| | ||||||||||| ||||||||||| ||| Sbjct 3304 CTGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAAC 3245 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||||| || | || | ||||| ||| | | || || || |||||||||| Sbjct 3244 TGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAA 3185 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GA 42786 || ||||||||| ||| |||||| ||||| |||||||||||| || ||| | || Sbjct 3184 GGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGC--GTGGCCTGA 3127 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| |||||||||||||||||||| || || | ||||| |||||||| | |||| Sbjct 3126 TGCCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACT 3067 Query 42847 TTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGG 42906 | |||||||| ||||| | | || ||| ||||| ||||||||||| || || Sbjct 3066 TCGCCTGCCTGATGTTC---AAGTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGG 3010 Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966 ||| || || || || | ||||||| |||||||| | ||| || | |||||||| Sbjct 3009 ACATTATTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGTTG 2950 Query 42967 CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATC 43026 | || | ||||||||| ||| || |||| |||||||| ||| || || || | | Sbjct 2949 ACATGCTTGGCATGAACTGCGATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGTT 2890 Query 43027 TCCTGTGCCAGATGGGT 43043 | ||| | || ||||| Sbjct 2889 TGCTGCTCGAGCTGGGT 2873 >seq25975 Length=7706 Score = 197 bits (218), Expect = 3e-45 Identities = 908/1422 (64%), Gaps = 54/1422 (4%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| |||||||||||||| ||||| |||||||| | | ||| | ||| || || Sbjct 3360 GTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGG 3301 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||||||| || || || || || || |||||||| || | || Sbjct 3300 CTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAA 3241 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTC--TGAGCTCGTTCCAGTCC 244267 |||||| || | | |||||| | || | || | | ||| ||||| | Sbjct 3240 CAGCAGCGAATTGCGGATACCGTGCTT--GGCTATTTTTTCCTTCAACTCCGACCAGTTC 3183 Query 244268 CACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTG 244327 |||| | | | |||| | || |||||| || ||||||| | ||||| Sbjct 3182 CACAGCTCAGTCGGCTCCTTG---TT------CCACATTTCGTACTGCAGGATGCCCTTA 3132 Query 244328 CTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC 244387 || || || || |||||||| || ||| || || || || ||||| || |||||| Sbjct 3131 CTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTA 3072 Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447 | || || || || | |||||||| ||||| || | ||||| | | |||| Sbjct 3071 GCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCC 3012 Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507 ||| | | || || ||| | ||||| | ||||||| |||||| || || || Sbjct 3011 TCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATA 2952 Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567 |||||||||| ||| ||| ||||||||||| | || || || || || || ||||| | Sbjct 2951 CCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACA 2892 Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAG 244627 || || | |||||| || ||||| || | || |||| || |||| ||| Sbjct 2891 TCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAA 2832 Query 244628 TCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTG 244687 || ||| | || || | | |||||| ||| | || | | Sbjct 2831 TCATACGTTTT-------------ATCTTGCT--TTACAAACATGTTCAAAGCAATCGAG 2787 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||| ||||| || || || || ||| | |||| ||||| |||||||| ||| Sbjct 2786 GCCAGATTGCACACCGCTACTTCGTCCTTCGACGAATACTCCACAATTTCGGTGCACAGG 2727 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGG-CG-TTGCAGGCGTCCT 244805 || || || ||||| || | | ||| ||||| |||| || ||||| || |||| Sbjct 2726 TTGGAACATTTAATGGTTCCGACATTCTGCTGATT--ACTTTTACGATTGCATGCATCCT 2669 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGG 244864 |||| |||||| | || | || || || | ||| | ||| || ||| | ||| | | Sbjct 2668 TGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGC-GAACCACAAG 2610 Query 244865 TCCCTAGCCTTGACC-GTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 ||| || |||||| ||| | | |||||| |||||| | |||||||| Sbjct 2609 TCCTGTGCTTTGACCTGTCGAATAAAGCGA-CCCTCTTTCTCGTACCCCGTGTACAGCTT 2551 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 ||||||||| ||||| || | || ||||| || || ||||| || || Sbjct 2550 CTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCT 2491 Query 244984 CCAC-TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGA 245042 |||| | | || ||| || | || |||||| || || || ||||| || || | || Sbjct 2490 CCACATTTCATTCG-CCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGA 2432 Query 245043 AGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAA 245102 | | ||| | || | ||| ||| ||||||||| ||| | || || | ||| || | Sbjct 2431 ACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGA 2372 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 | || || | ||||| || |||| |||| |||| || || |||| |||||||| | Sbjct 2371 ATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGC 2312 Query 245163 CCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222 |||| ||||| || | |||| | | |||||| | ||||| | ||||| | Sbjct 2311 CCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTG 2252 Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT-- 245280 | ||||| ||||| |||||| | ||||| | | || ||| | || || | Sbjct 2251 AAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGA---TGCAG-TGCACGTTC 2196 Query 245281 -GCCTAGT-CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 ||| | | || ||||| ||| || || || || || ||| | || || || Sbjct 2195 AGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATA 2136 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398 ||||| ||||| || |||| | |||||||| ||||| || ||||| ||| | Sbjct 2135 CCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCC----G 2080 Query 245399 CTGC--ACGAGTTG--AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAA 245454 |||| | | || |||| || || |||||||||||||||||| || || | Sbjct 2079 CTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAG 2020 Query 245455 CCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGAT 245496 ||||| | || | || |||||||| || |||||||| Sbjct 2019 ATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGAT 1978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943980717035440