Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1284 111 1e-19 >seq1284 Length=4647 Score = 111 bits (122), Expect = 1e-19 Identities = 233/345 (68%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| || | ||| | || | | ||| || || |||||||||||||| Sbjct 3549 AGTCCTGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAACTAGCAATGTTAAAAGGC 3490 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||| | || | || | ||||||| ||| || |||||||| || ||| | Sbjct 3489 ACGCCCAGACCTACATCGGCTGAACGTTGATACATCTGGCACGAAAGCTCTCCATCACCA 3430 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||| |||| || || |||| || || || || ||||| || | || | || Sbjct 3429 ACAAAAAACTGTGCCAAGCAGTGGCATGGTGGTAGGGCCATGTTCGGAATATCAGAAGGA 3370 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | ||| ||||||| | |||| |||||||| |||||| ||| | | Sbjct 3369 TTCCAGGCGCTCATGATGATTCGACGATCGAAAGGATTATTCTTTATTTTATCGATCACT 3310 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT-CCGCGTCCACGTACGCCGC 20535 | | ||| || || | || || || | ||| || | | | || ||| || || Sbjct 3309 TCAGCCAACTGATCTATGCCTTGTCCCGCATAATCGTCGTGACATGT-TTTGTATGCGGC 3251 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||||||| | |||||| || ||||| ||||| ||||| || || Sbjct 3250 ACCAAAGTGACGCCACTGAAAGCCGTACACAGGGCCCAAGTCACC 3206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441205249367960