Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3879 100 3e-16 seq14813 93.3 5e-14 seq28749 91.5 2e-13 seq27305 91.5 2e-13 seq25207 91.5 2e-13 seq24018 91.5 2e-13 seq11114 91.5 2e-13 seq25255 89.7 6e-13 seq11054 89.7 6e-13 seq26056 87.8 2e-12 seq15369 87.8 2e-12 seq22949 86.0 7e-12 >seq3879 Length=3897 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 42002 CAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAG 42061 ||| ||||| || |||||| || || |||||||| | || ||| || | || || || Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838 Query 42062 CTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGAT 42121 ||||||||| ||||| || | |||||||| || | || | || |||||||||| ||| Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778 Query 42122 TTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCGACCGTGATGGTTTT 42178 || || | || | | |||||| |||| || || || | |||||||| || Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTC---CGATGGCTCGACCTCCAAAGTGATGGTCTT 3721 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || ||||| || || ||||| ||||| Sbjct 3720 GCCAGTCAGCGTTTTCACGAAGATCTGCAT 3691 >seq14813 Length=1774 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| ||||| || | | |||||||||| ||||||||||||||||||||| |||| Sbjct 869 AAAAATCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 928 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||| |||||| Sbjct 929 TGACCACTATACTATCGAGGA 949 >seq28749 Length=22875 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||| |||| |||| || | | |||||||||| ||||||||||||||||||||| || Sbjct 15998 AAAACTTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 16057 Query 57056 ACTCACCACTATACTACCGAGGAT 57079 ||| |||||||||||| ||||||| Sbjct 16058 ACTTACCACTATACTATCGAGGAT 16081 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 16293 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 16234 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 16233 TACTATCGAGGAT 16221 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 15600 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 15659 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 15660 TACTATCGAGGA 15671 >seq27305 Length=27287 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 || ||||||| ||| || | | |||||||||| ||||||||||||||||||||| ||| Sbjct 10586 AAGAATTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 10645 Query 57057 CTCACCACTATACTACCGAGGA 57078 || |||||||||||| |||||| Sbjct 10646 CTGACCACTATACTATCGAGGA 10667 >seq25207 Length=8452 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 || ||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 1820 TTATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 1879 Query 57063 ACTATACTACCGAGGATTGAATATA 57087 ||||||||| |||||| | ||||| Sbjct 1880 ACTATACTATCGAGGAATTCATATA 1904 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 ||| |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 596 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 655 Query 57063 ACTATACTACCGAGGAT 57079 ||||||||| ||||||| Sbjct 656 ACTATACTATCGAGGAT 672 >seq24018 Length=9709 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 ||||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 6806 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 6865 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 6866 CTATACTATCGAGGA 6880 >seq11114 Length=38139 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||| ||||| ||| || | | |||||||||| ||||||||||||||||||||| ||| Sbjct 25087 AAAAGTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 25028 Query 57057 CTCACCACTATACTACCGAGGA 57078 || |||||||||||| |||||| Sbjct 25027 CTGACCACTATACTATCGAGGA 25006 >seq25255 Length=8333 Score = 89.7 bits (98), Expect = 6e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 |||| | |||| || | | |||||||||| ||||||||||||||||||||| ||||| Sbjct 3728 AAATCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 3787 Query 57060 ACCACTATACTACCGAGGA 57078 |||||||||||| |||||| Sbjct 3788 ACCACTATACTATCGAGGA 3806 >seq11054 Length=2348 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 56995 ATGAAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052 || ||||| || ||||| || | | |||||||||| ||||||||||||||||||||| Sbjct 1474 ATAAAAAACTTCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 1415 Query 57053 CATACTCACCACTATACTACCGAGGA 57078 ||||| |||||||||||| |||||| Sbjct 1414 GATACTGACCACTATACTATCGAGGA 1389 >seq26056 Length=7591 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 ||||| |||||||| | | | |||||||||| ||||||||||||||||||||| | Sbjct 2475 AAAAACATTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 2534 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||| |||||||||||| |||||| Sbjct 2535 TACTGACCACTATACTATCGAGGA 2558 >seq15369 Length=13753 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 12271 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12330 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 12331 TACTATCGAGGAT 12343 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 13374 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 13433 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 13434 TACTATCGAGGAT 13446 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 12691 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12750 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 12751 TACTATCGAGGA 12762 >seq22949 Length=11356 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 8639 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 8580 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 8579 TACTATCGAGGA 8568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543006589630960