Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3879 100 3e-16
seq14813 93.3 5e-14
seq28749 91.5 2e-13
seq27305 91.5 2e-13
seq25207 91.5 2e-13
seq24018 91.5 2e-13
seq11114 91.5 2e-13
seq25255 89.7 6e-13
seq11054 89.7 6e-13
seq26056 87.8 2e-12
seq15369 87.8 2e-12
seq22949 86.0 7e-12
>seq3879
Length=3897
Score = 100 bits (110), Expect = 3e-16
Identities = 149/210 (71%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 42002 CAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAG 42061
||| ||||| || |||||| || || |||||||| | || ||| || | || || ||
Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838
Query 42062 CTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGAT 42121
||||||||| ||||| || | |||||||| || | || | || |||||||||| |||
Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778
Query 42122 TTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCGACCGTGATGGTTTT 42178
|| || | || | | |||||| |||| || || || | |||||||| ||
Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTC---CGATGGCTCGACCTCCAAAGTGATGGTCTT 3721
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || ||||| || || ||||| |||||
Sbjct 3720 GCCAGTCAGCGTTTTCACGAAGATCTGCAT 3691
>seq14813
Length=1774
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| ||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 869 AAAAATCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 928
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||| ||||||
Sbjct 929 TGACCACTATACTATCGAGGA 949
>seq28749
Length=22875
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/84 (85%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055
|||| |||| |||| || | | |||||||||| ||||||||||||||||||||| ||
Sbjct 15998 AAAACTTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 16057
Query 57056 ACTCACCACTATACTACCGAGGAT 57079
||| |||||||||||| |||||||
Sbjct 16058 ACTTACCACTATACTATCGAGGAT 16081
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 16293 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 16234
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 16233 TACTATCGAGGAT 16221
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 15600 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 15659
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 15660 TACTATCGAGGA 15671
>seq27305
Length=27287
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|| ||||||| ||| || | | |||||||||| ||||||||||||||||||||| |||
Sbjct 10586 AAGAATTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 10645
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||| ||||||
Sbjct 10646 CTGACCACTATACTATCGAGGA 10667
>seq25207
Length=8452
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|| ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 1820 TTATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 1879
Query 57063 ACTATACTACCGAGGATTGAATATA 57087
||||||||| |||||| | |||||
Sbjct 1880 ACTATACTATCGAGGAATTCATATA 1904
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 596 TTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 655
Query 57063 ACTATACTACCGAGGAT 57079
||||||||| |||||||
Sbjct 656 ACTATACTATCGAGGAT 672
>seq24018
Length=9709
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 6806 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 6865
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 6866 CTATACTATCGAGGA 6880
>seq11114
Length=38139
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|||| ||||| ||| || | | |||||||||| ||||||||||||||||||||| |||
Sbjct 25087 AAAAGTTTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 25028
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||| ||||||
Sbjct 25027 CTGACCACTATACTATCGAGGA 25006
>seq25255
Length=8333
Score = 89.7 bits (98), Expect = 6e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 57000 AAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059
|||| | |||| || | | |||||||||| ||||||||||||||||||||| |||||
Sbjct 3728 AAATCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 3787
Query 57060 ACCACTATACTACCGAGGA 57078
|||||||||||| ||||||
Sbjct 3788 ACCACTATACTATCGAGGA 3806
>seq11054
Length=2348
Score = 89.7 bits (98), Expect = 6e-13
Identities = 72/86 (84%), Gaps = 2/86 (2%)
Strand=Plus/Minus
Query 56995 ATGAAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052
|| ||||| || ||||| || | | |||||||||| |||||||||||||||||||||
Sbjct 1474 ATAAAAAACTTCCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 1415
Query 57053 CATACTCACCACTATACTACCGAGGA 57078
||||| |||||||||||| ||||||
Sbjct 1414 GATACTGACCACTATACTATCGAGGA 1389
>seq26056
Length=7591
Score = 87.8 bits (96), Expect = 2e-12
Identities = 70/84 (83%), Gaps = 3/84 (4%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
||||| |||||||| | | | |||||||||| ||||||||||||||||||||| |
Sbjct 2475 AAAAACATTCTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 2534
Query 57055 TACTCACCACTATACTACCGAGGA 57078
|||| |||||||||||| ||||||
Sbjct 2535 TACTGACCACTATACTATCGAGGA 2558
>seq15369
Length=13753
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 12271 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12330
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 12331 TACTATCGAGGAT 12343
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 13374 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 13433
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 13434 TACTATCGAGGAT 13446
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 12691 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 12750
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 12751 TACTATCGAGGA 12762
>seq22949
Length=11356
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 8639 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 8580
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 8579 TACTATCGAGGA 8568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543006589630960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |