Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq25975 147 2e-30 seq9735 129 6e-25 seq3879 86.0 6e-12 >seq25975 Length=7706 Score = 147 bits (162), Expect = 2e-30 Identities = 526/809 (65%), Gaps = 25/809 (3%) Strand=Plus/Minus Query 154631 CACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTT 154690 ||||||||| | ||||| || ||| |||||| || | || | |||||| ||| Sbjct 2745 CACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTT 2686 Query 154691 GATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAAT 154750 |||||||| || ||||||| ||||| || |||||||||||| || | || || Sbjct 2685 ACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGAT 2626 Query 154751 AATTGTGCGAAACAGACTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCA 154808 || ||||| || | || | || | || || | | |||| ||| || |||| Sbjct 2625 GAT--CGCGAACCACAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCG 2568 Query 154809 TATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGG 154868 || |||||| || || |||||| || || || | || ||||||||| | Sbjct 2567 TACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCG 2508 Query 154869 TCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGC 154928 | |||||||||| ||||||||| || | || || ||||| |||| |||||| Sbjct 2507 TGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGT 2448 Query 154929 ACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTT 154988 | ||||| |||||| |||| || || || ||||| ||| ||||| |||| Sbjct 2447 ATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTT 2388 Query 154989 AAATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCT 155048 | || | ||| || ||| || | |||||||| || | ||| | ||| | || || Sbjct 2387 AGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCC- 2329 Query 155049 TTGCGTTTT----CCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAA 155104 || |||| || || |||||||||| || | ||| ||||||||||||| || Sbjct 2328 AGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCAT 2269 Query 155105 TGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC----ACGTATCGCGCTGCCGCGAGCAC 155160 || ||| ||| | | | ||||| ||||| | |||| | |||| | | Sbjct 2268 CGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGAT 2209 Query 155161 GCGCTTTATGAACATTAACGCCCAA-ACCTCCGCCGTATTTAGATATTTGCGCACAGTCC 155219 || || || || | |||||| || ||| | | || || || ||||||| | | Sbjct 2208 GC----AGTGCACGTTCA-GCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGC 2154 Query 155220 GCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAA 155279 || ||| ||||| || || | ||||| || || || |||| || ||||| ||| Sbjct 2153 TTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAA 2094 Query 155280 GATAATTGAGGTTG-AGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACAT 155338 || | ||||| | | | |||| || ||||| | || || ||||| ||||| | Sbjct 2093 GAGAGCTGAGGCCGCTGCGTAGCC-GCTGCAAACATGGTCGGTGAGGCGTGGGTAAA-GT 2036 Query 155339 TTTGTT--GGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATA 155396 ||| | | | | || || |||||||| || || || |||| |||||| || Sbjct 2035 AGCGTTCAGACAG-CAGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATG 1977 Query 155397 CCGATCGCCACGCGCATCAGCATGTGTTG 155425 ||||| || |||||||||||||| || || Sbjct 1976 CCGATAGCGACGCGCATCAGCATATGCTG 1948 Score = 98.7 bits (108), Expect = 1e-15 Identities = 495/780 (63%), Gaps = 18/780 (2%) Strand=Plus/Minus Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730 ||||||||| ||||| ||| |||| ||||||| || || ||||||||||||||||| Sbjct 3708 TTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCC 3649 Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAA-TAACGCGAAACTGG 153789 ||||||||||| |||||| || | || | || | | || || | ||| Sbjct 3648 AGTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTAC-CGTAGTTGG 3590 Query 153790 GCTGCGCTA--TAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGC 153847 | | ||| | | || | || ||||| || ||||||||| || || |||||||| || Sbjct 3589 GTTCCGCGACGTGAATA--TTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGC 3532 Query 153848 CGCCATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAA 153906 ||||| | || || ||||| |||| || ||||| || |||||||| | | || Sbjct 3531 TGCCATTTTGATGCACGTTTTCACTGAG-ATCTCCCATACCGTTTTGTAAAGATCGCGAA 3473 Query 153907 TGTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGC 153966 | || | || || ||||| || || | || | || | ||| || Sbjct 3472 TTTCTTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCT 3413 Query 153967 GCATGTGGTCGTCGTACAA----AT-TTAGTCGACATAAATCTTCAACCAAGTGCTGGTT 154021 ||| | | || | || || || ||| | ||| | | | || ||||| Sbjct 3412 TCATATCGAGATCCCATAATCCCATGTTGGTC-----AGATCCTGCAGGAGATGGTGGTT 3358 Query 154022 AATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTC 154081 | || ||||| || || | | ||||| | || | || ||| | ||||| Sbjct 3357 TACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTC 3298 Query 154082 GAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAA 154141 ||||||||| |||||||| | ||||| ||||| | || || ||||| |||| || Sbjct 3297 GAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAG 3238 Query 154142 CAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAA 154201 || || || || | |||||| || || || || || || | ||| ||||||| Sbjct 3237 CAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAG 3178 Query 154202 GTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTC 154261 | || || | | ||||||||| ||||| |||| | ||| |||| ||||||| | Sbjct 3177 CTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACC 3118 Query 154262 ACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGC 154321 || | |||||| || | | ||||| || || || ||||| | || | Sbjct 3117 CTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCC 3058 Query 154322 ATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGTACGG 154381 | || | ||||||| ||||||| ||| | | ||| || | || ||||||||||| Sbjct 3057 GAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG 2998 Query 154382 CAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTG 154441 | | || || || |||||||| | || |||| || | || | ||||| ||| Sbjct 2997 ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTG 2938 >seq9735 Length=15595 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||||| |||||||| || ||||| ||||| || | Sbjct 4837 ACCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGA 4778 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || ||||||||||||||| | || || |||||||| || ||||| Sbjct 4777 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGG 4718 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| ||| ||| | || || | || || Sbjct 4717 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 4658 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||||||||| | ||||| |||||||| ||||| || Sbjct 4657 CTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTT 4607 >seq3879 Length=3897 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || ||||||||||| | | || || | || || |||||||| ||| Sbjct 3887 GTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCG 3828 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | |||||||| || |||||||| || || || || || || || ||| Sbjct 3827 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 3768 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || || || | ||| | ||||||||| |||| ||| Sbjct 3767 ACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTT 3708 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 3707 TTCACGAAGATCTGCAT 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499455128588360