Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 147 2e-30
seq9735 129 6e-25
seq3879 86.0 6e-12
>seq25975
Length=7706
Score = 147 bits (162), Expect = 2e-30
Identities = 526/809 (65%), Gaps = 25/809 (3%)
Strand=Plus/Minus
Query 154631 CACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTT 154690
||||||||| | ||||| || ||| |||||| || | || | |||||| |||
Sbjct 2745 CACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTT 2686
Query 154691 GATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAAT 154750
|||||||| || ||||||| ||||| || |||||||||||| || | || ||
Sbjct 2685 ACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGAT 2626
Query 154751 AATTGTGCGAAACAGACTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCA 154808
|| ||||| || | || | || | || || | | |||| ||| || ||||
Sbjct 2625 GAT--CGCGAACCACAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCG 2568
Query 154809 TATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGG 154868
|| |||||| || || |||||| || || || | || ||||||||| |
Sbjct 2567 TACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCG 2508
Query 154869 TCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGC 154928
| |||||||||| ||||||||| || | || || ||||| |||| ||||||
Sbjct 2507 TGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGT 2448
Query 154929 ACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTT 154988
| ||||| |||||| |||| || || || ||||| ||| ||||| ||||
Sbjct 2447 ATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTT 2388
Query 154989 AAATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCT 155048
| || | ||| || ||| || | |||||||| || | ||| | ||| | || ||
Sbjct 2387 AGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCC- 2329
Query 155049 TTGCGTTTT----CCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAA 155104
|| |||| || || |||||||||| || | ||| ||||||||||||| ||
Sbjct 2328 AGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCAT 2269
Query 155105 TGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC----ACGTATCGCGCTGCCGCGAGCAC 155160
|| ||| ||| | | | ||||| ||||| | |||| | |||| | |
Sbjct 2268 CGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGAT 2209
Query 155161 GCGCTTTATGAACATTAACGCCCAA-ACCTCCGCCGTATTTAGATATTTGCGCACAGTCC 155219
|| || || || | |||||| || ||| | | || || || ||||||| | |
Sbjct 2208 GC----AGTGCACGTTCA-GCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGC 2154
Query 155220 GCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAA 155279
|| ||| ||||| || || | ||||| || || || |||| || ||||| |||
Sbjct 2153 TTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAA 2094
Query 155280 GATAATTGAGGTTG-AGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACAT 155338
|| | ||||| | | | |||| || ||||| | || || ||||| ||||| |
Sbjct 2093 GAGAGCTGAGGCCGCTGCGTAGCC-GCTGCAAACATGGTCGGTGAGGCGTGGGTAAA-GT 2036
Query 155339 TTTGTT--GGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATA 155396
||| | | | | || || |||||||| || || || |||| |||||| ||
Sbjct 2035 AGCGTTCAGACAG-CAGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATG 1977
Query 155397 CCGATCGCCACGCGCATCAGCATGTGTTG 155425
||||| || |||||||||||||| || ||
Sbjct 1976 CCGATAGCGACGCGCATCAGCATATGCTG 1948
Score = 98.7 bits (108), Expect = 1e-15
Identities = 495/780 (63%), Gaps = 18/780 (2%)
Strand=Plus/Minus
Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730
||||||||| ||||| ||| |||| ||||||| || || |||||||||||||||||
Sbjct 3708 TTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCC 3649
Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAA-TAACGCGAAACTGG 153789
||||||||||| |||||| || | || | || | | || || | |||
Sbjct 3648 AGTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTAC-CGTAGTTGG 3590
Query 153790 GCTGCGCTA--TAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGC 153847
| | ||| | | || | || ||||| || ||||||||| || || |||||||| ||
Sbjct 3589 GTTCCGCGACGTGAATA--TTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGC 3532
Query 153848 CGCCATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAA 153906
||||| | || || ||||| |||| || ||||| || |||||||| | | ||
Sbjct 3531 TGCCATTTTGATGCACGTTTTCACTGAG-ATCTCCCATACCGTTTTGTAAAGATCGCGAA 3473
Query 153907 TGTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGC 153966
| || | || || ||||| || || | || | || | ||| ||
Sbjct 3472 TTTCTTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCT 3413
Query 153967 GCATGTGGTCGTCGTACAA----AT-TTAGTCGACATAAATCTTCAACCAAGTGCTGGTT 154021
||| | | || | || || || ||| | ||| | | | || |||||
Sbjct 3412 TCATATCGAGATCCCATAATCCCATGTTGGTC-----AGATCCTGCAGGAGATGGTGGTT 3358
Query 154022 AATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTC 154081
| || ||||| || || | | ||||| | || | || ||| | |||||
Sbjct 3357 TACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTC 3298
Query 154082 GAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAA 154141
||||||||| |||||||| | ||||| ||||| | || || ||||| |||| ||
Sbjct 3297 GAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAG 3238
Query 154142 CAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAA 154201
|| || || || | |||||| || || || || || || | ||| |||||||
Sbjct 3237 CAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAG 3178
Query 154202 GTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTC 154261
| || || | | ||||||||| ||||| |||| | ||| |||| ||||||| |
Sbjct 3177 CTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACC 3118
Query 154262 ACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGC 154321
|| | |||||| || | | ||||| || || || ||||| | || |
Sbjct 3117 CTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCC 3058
Query 154322 ATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGTACGG 154381
| || | ||||||| ||||||| ||| | | ||| || | || |||||||||||
Sbjct 3057 GAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG 2998
Query 154382 CAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTG 154441
| | || || || |||||||| | || |||| || | || | ||||| |||
Sbjct 2997 ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTG 2938
>seq9735
Length=15595
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || ||||||| |||||||| || ||||| ||||| || |
Sbjct 4837 ACCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGA 4778
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| | || || ||||||||||||||| | || || |||||||| || |||||
Sbjct 4777 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGG 4718
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || || || || || ||| ||| ||| | || || | || ||
Sbjct 4717 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 4658
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||||||||| | ||||| |||||||| ||||| ||
Sbjct 4657 CTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTT 4607
>seq3879
Length=3897
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || ||||||||||| | | || || | || || |||||||| |||
Sbjct 3887 GTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCG 3828
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | |||||||| || |||||||| || || || || || || || |||
Sbjct 3827 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 3768
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | || || || | ||| | ||||||||| |||| |||
Sbjct 3767 ACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTT 3708
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 3707 TTCACGAAGATCTGCAT 3691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499455128588360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |