Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq25975 105 7e-18 >seq25975 Length=7706 Score = 105 bits (116), Expect = 7e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 95093 CGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGT 95152 ||||||| ||||||| ||||| ||||| || || || || || ||||||||||| || | Sbjct 3233 CGCTGCTGTTGGCCCCGATGCCGACGGCTTCGACAGCCCAAATTCTTGGCAACAATGAAT 3292 Query 95153 CGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCG 95212 ||||||| |||| ||| || ||||| ||||| || || ||||| | || || || | | Sbjct 3293 CGTTCGAGCCCTACACGTCGAACGTATACAATAGACGCGTGCTATCGGGTGAGTTTCAGG 3352 Query 95213 TCATCAACAAGCACCTCCTACGGGACCTGAC 95243 | | ||| | || ||||| | ||| ||||| Sbjct 3353 TGGTAAACCACCATCTCCTGCAGGATCTGAC 3383 Score = 91.5 bits (100), Expect = 1e-13 Identities = 309/480 (64%), Gaps = 6/480 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | |||||| |||| |||| || | | ||| ||| | ||||| ||||| ||| Sbjct 2047 GCCTCACCGACCATGTTTGCAGCGGCTACGCAGCGGCCTCAGCTCTCTTCCTGTTTTCTG 2106 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 |||| | | || ||| || |||| ||| | || ||| | |||||| Sbjct 2107 CTGACCATGTCTGATGATAGCATTGAGGGTATTTACGATACTCTGAAGCAATGTGCGCTG 2166 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || ||||| | || || || || ||| | | || ||| | | || || | ||| | Sbjct 2167 ATTTCAAAGTCGGCCGGTGGCATTGGGCTGAACGTGCACTGCATCCGCGCGAAGGGAACA 2226 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| ||| || || || | || ||||| | || || ||||| || || | |||| Sbjct 2227 TACATCTCCGGCACAAACGGTATTTCAAACGGATTGGTGCCGATGCTGCGCGTGTACAAC 2286 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 || |||| || |||||||| ||||| || | ||| || | ||||| ||||| Sbjct 2287 AATACGGCACGGTACGTGGATCAGGGCGGCAACAAAAGGCCTGGAGCATTCGCCATCTAT 2346 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC---GGC 94248 || || || ||||| | || || | || |||| || |||||| || ||| Sbjct 2347 CTGGAACCGTGGCATGGTGATGTATTCGAGTTTCTCGATCT---AAAGAAAAACACTGGC 2403 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | ||| | ||| | ||||||||||| ||| | || || || || ||| Sbjct 2404 AAGGAAGAGGTCCGTGCCCGCGACATGTTCTACGCTCTGTGGATACCGGATCTGTTCATG 2463 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || || || ||| || ||||| || | ||||| | || |||||||| ||| Sbjct 2464 AAGCGTGTGGAGGCGAATGAAATGTGGAGCCTGATGTGTCCACACGATTGTCCCGGTCTG 2523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494535396889240