Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2547 95.1 9e-15 >seq2547 Length=19309 Score = 95.1 bits (104), Expect = 9e-15 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 |||||||| || ||||||| |||||| || || | ||| |||| | |||||||| Sbjct 16617 GCCGGGTTTGGAGTGACGGGCGGCGTACACCGCCTCTGGTGCCACCGTTCGTACAAGGCG 16676 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| | | | ||||| | |||| |||| | || || || ||||| ||| Sbjct 16677 AAGCTACCGCTTCGCATCATCCTGATGTGCTGCTACTCGATCGCGGGCCAAAACACGATC 16736 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCC 108518 | ||||| | ||||| | | || ||||||||||| || || ||||| || || Sbjct 16737 TACGACTGGGTCCGGGATCATCGCATCCATCACAAGTACTCGGAAACGGACGG-TGATCC 16795 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| | Sbjct 16796 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTACGCAAGCA 16855 Query 108579 CCCCGA 108584 ||| || Sbjct 16856 CCCGGA 16861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381631497416136