Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 360 2e-94
seq22281 111 2e-19
seq29242 84.2 2e-11
seq9735 84.2 2e-11
>seq25975
Length=7706
Score = 360 bits (398), Expect = 2e-94
Identities = 1151/1763 (65%), Gaps = 48/1763 (3%)
Strand=Plus/Minus
Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTAATTG 152771
|| ||||| |||||||||||||||||||| ||||| | || |||| |||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 152772 TGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCTC 152831
|| ||||| |||| | | |||| | |||| ||| ||| | ||| |||||||| |
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 152832 TGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTGCCTTC-ATCT 152889
||||| || || || || || || ||||| | || || |||||| || ||||
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCA--CGTTTTCACTGAGATCT 3500
Query 152890 CCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAG 152949
|||| | |||||||| | || || | ||| ||| ||||| || ||||| |
Sbjct 3499 CCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATTG 3440
Query 152950 AGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTTAATGA 153009
| || |||| | | ||| |||| || ||| | | | || || | |
Sbjct 3439 ATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCA 3380
Query 153010 GGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAAT 153069
| || | | | | ||||| ||||| |||||||| |||| | ||| ||||| |
Sbjct 3379 GATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGT 3320
Query 153070 ATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTG 153129
|||| || ||| | || || || ||||| || ||||| || ||||| || || | |
Sbjct 3319 ATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAG 3260
Query 153130 CGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC---GCTCGAATGTCGT 153186
| |||||||| |||| || || ||||| || | |||||| ||| || | |
Sbjct 3259 CCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCT---ATTTTTT 3203
Query 153187 CCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA 153246
|||||||| || ||| | ||||||| | | ||| | ||||||||| |||||||| |
Sbjct 3202 CCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCA 3143
Query 153247 ACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCA 153306
| || ||| | ||||| || | |||| ||| || || || |||||
Sbjct 3142 GGATGCCCTTACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCA 3083
Query 153307 GTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAA 153366
|| |||||||| || || || || | || ||||||||| ||||||| || ||
Sbjct 3082 ACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCT 3023
Query 153367 CGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCT 153426
|| || ||||| |||||||| ||||| | | || || ||||||| ||||
Sbjct 3022 TTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCT 2963
Query 153427 GGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGAT 153486
| | ||| | ||||||||||| || | |||| |||| | || || | ||||
Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903
Query 153487 AGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAA 153546
||| ||| ||| || || ||||| || |||||| || | |||| | |||| |
Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCA 2843
Query 153547 GTTTCTCGAAATCATAGGTCATTTCGTCGACGCGT-ACGCATCGATTCACGGCAATAGAC 153605
| || |||||||| || | || | || | || | |||| ||||| ||
Sbjct 2842 GCTTGGTAAAATCATACGTTTTATCTT----GCTTTACAAACATGTTCAAAGCAATCGAG 2787
Query 153606 GCCAGATTACAGACGGC-----CGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGC 153660
|||||||| || || || |||| ||||| || |||| ||| || |||| ||
Sbjct 2786 GCCAGATTGCACACCGCTACTTCGTC-CTTCGACGAA----TACTCCACAATTTCGGTGC 2732
Query 153661 AGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGT 153720
| |||||| ||||| ||| || | ||| |||||||| ||||| |||||||| || |
Sbjct 2731 ACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCAT 2672
Query 153721 CTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA---AACCTAT 153777
| ||| | |||||||| ||| |||| || || || |||| |||| ||| ||||
Sbjct 2671 CCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCA-- 2614
Query 153778 GCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACA 153837
|| |||||| ||| ||| | | | |||| ||||| ||||||| | | |||||
Sbjct 2613 -CAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACA 2555
Query 153838 GTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCA 153897
| ||| ||||| || || | || || || |||||||| | || ||||||||||
Sbjct 2554 GCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCA 2495
Query 153898 GCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGT 153957
| |||||| || | || | || || ||||||||||||||| | ||| || ||||
Sbjct 2494 GGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGT 2435
Query 153958 ACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACG 154016
| | | |||||| || | || ||| ||| |||| || |||| ||| ||
Sbjct 2434 AGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACT 2375
Query 154017 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCAC----CTTTACGCTT 154072
| | | | || | ||||| ||||| | |||| ||| | || | | || | ||
Sbjct 2374 CGA-ATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG-TT 2317
Query 154073 TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132
||||||||||| |||| || || |||||||| | ||||||| ||| || ||| ||
Sbjct 2316 GCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCC 2257
Query 154133 GCTTGCGGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACG 154190
| ||| | ||||| || || | ||| | | || ||||| | ||||||
Sbjct 2256 GTTTGAAATACCGTTTGTGCCGGA--GATGTATGTTCCCTTCGCGCGGATGCAGTGCACG 2199
Query 154191 TTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGC-CCAGCGTCCTGT 154248
|| | |||||||| ||| | ||||||| || ||||||| | || ||| || ||
Sbjct 2198 TTCAGCCCAATGCCACCGGCCGACTTTGAAAT--CAGCGCACATTGCTTCAGAGTATCGT 2141
Query 154249 AGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAA 154308
| || || || |||||||| || | | |||| ||||| ||| | | || ||
Sbjct 2140 AAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCC 2081
Query 154309 TGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA-CAGTTTTTGGCTCATC 154367
|||| |||| | ||| | ||| || ||||| ||||| || || | || |
Sbjct 2080 GCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAG-ACAGC 2022
Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427
| ||||||||||| || | ||||| | || ||||| ||||||| |||||||||
Sbjct 2021 AGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGC 1962
Query 154428 ATGAGCATGTGCTGCGGACGTTC 154450
|| ||||| ||||| || || ||
Sbjct 1961 ATCAGCATATGCTGTGGTCGCTC 1939
>seq22281
Length=11977
Score = 111 bits (122), Expect = 2e-19
Identities = 293/437 (67%), Gaps = 9/437 (2%)
Strand=Plus/Minus
Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363
||| | ||||| |||| ||| |||||||||| || |||||| | ||||| | ||
Sbjct 3304 CTGTTTAATGCCATCGAA-ACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAA 3246
Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423
|||||| ||| | | || | | | ||||| | ||||| |||||| |||||
Sbjct 3245 CTGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGA 3186
Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483
|| | || || ||||||||| || |||| || | | || | | ||| | ||
Sbjct 3185 AGGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGAT 3126
Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543
||| || || || ||| |||||| |||| |||||||||||||| |||||| |||||
Sbjct 3125 GCCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTT 3066
Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGA 52602
|| ||||| | |||| | ||| | ||| | || ||| | || | ||
Sbjct 3065 CGCCTGCCTGATGTTCAAGTATCTGGTG-CAGAAGCCGTCGA--AGGAGCGCGTGACGGA 3009
Query 52603 GCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCG 52662
||| | || ||||| | ||||| ||||||| || ||| || ||||| || |
Sbjct 3008 -CATTATTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGTTG 2950
Query 52663 AGCTGCTGGGCATGAAC-GCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGT 52721
| |||| ||||||||| ||| | |||| ||||||||||||||||||| ||||||
Sbjct 2949 ACATGCTTGGCATGAACTGCG-ATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGT 2891
Query 52722 CTGTTGGTGCAGCTCGG 52738
|| || | |||| ||
Sbjct 2890 TTGCTGCTCGAGCTGGG 2874
>seq29242
Length=5648
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | ||| | ||| | | | || ||||| |||||||| ||||| |
Sbjct 5416 CCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGAC 5475
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || || || |||| | |||| |||||||| || || || ||
Sbjct 5476 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 5535
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566
|| || || || || ||| | || | || | | || | || |||| | ||| ||
Sbjct 5536 ATTCCCTCCTTATCC-TGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAAC 5594
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | || || || ||||| ||||| ||||||||||||||
Sbjct 5595 CTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq9735
Length=15595
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| || | ||| | | | || ||||| ||||| ||||||||| | ||| ||
Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || || || |||| | |||| |||||||| || || ||||| || ||||| ||
Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705
Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579
|| ||| || || | | || | ||||| | | ||| ||||| | || |
Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645
Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|| || || || || ||||| || ||||||||||||
Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496074012589680
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