Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq25975 360 2e-94 seq22281 111 2e-19 seq29242 84.2 2e-11 seq9735 84.2 2e-11 >seq25975 Length=7706 Score = 360 bits (398), Expect = 2e-94 Identities = 1151/1763 (65%), Gaps = 48/1763 (3%) Strand=Plus/Minus Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTAATTG 152771 || ||||| |||||||||||||||||||| ||||| | || |||| ||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 152772 TGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCTC 152831 || ||||| |||| | | |||| | |||| ||| ||| | ||| |||||||| | Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 152832 TGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTGCCTTC-ATCT 152889 ||||| || || || || || || ||||| | || || |||||| || |||| Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCA--CGTTTTCACTGAGATCT 3500 Query 152890 CCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAG 152949 |||| | |||||||| | || || | ||| ||| ||||| || ||||| | Sbjct 3499 CCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATTG 3440 Query 152950 AGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTTAATGA 153009 | || |||| | | ||| |||| || ||| | | | || || | | Sbjct 3439 ATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCA 3380 Query 153010 GGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAAT 153069 | || | | | | ||||| ||||| |||||||| |||| | ||| ||||| | Sbjct 3379 GATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGT 3320 Query 153070 ATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTG 153129 |||| || ||| | || || || ||||| || ||||| || ||||| || || | | Sbjct 3319 ATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAG 3260 Query 153130 CGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC---GCTCGAATGTCGT 153186 | |||||||| |||| || || ||||| || | |||||| ||| || | | Sbjct 3259 CCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCT---ATTTTTT 3203 Query 153187 CCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA 153246 |||||||| || ||| | ||||||| | | ||| | ||||||||| |||||||| | Sbjct 3202 CCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCA 3143 Query 153247 ACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCA 153306 | || ||| | ||||| || | |||| ||| || || || ||||| Sbjct 3142 GGATGCCCTTACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCA 3083 Query 153307 GTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAA 153366 || |||||||| || || || || | || ||||||||| ||||||| || || Sbjct 3082 ACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCT 3023 Query 153367 CGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCT 153426 || || ||||| |||||||| ||||| | | || || ||||||| |||| Sbjct 3022 TTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCT 2963 Query 153427 GGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGAT 153486 | | ||| | ||||||||||| || | |||| |||| | || || | |||| Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903 Query 153487 AGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAA 153546 ||| ||| ||| || || ||||| || |||||| || | |||| | |||| | Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCA 2843 Query 153547 GTTTCTCGAAATCATAGGTCATTTCGTCGACGCGT-ACGCATCGATTCACGGCAATAGAC 153605 | || |||||||| || | || | || | || | |||| ||||| || Sbjct 2842 GCTTGGTAAAATCATACGTTTTATCTT----GCTTTACAAACATGTTCAAAGCAATCGAG 2787 Query 153606 GCCAGATTACAGACGGC-----CGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGC 153660 |||||||| || || || |||| ||||| || |||| ||| || |||| || Sbjct 2786 GCCAGATTGCACACCGCTACTTCGTC-CTTCGACGAA----TACTCCACAATTTCGGTGC 2732 Query 153661 AGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGT 153720 | |||||| ||||| ||| || | ||| |||||||| ||||| |||||||| || | Sbjct 2731 ACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCAT 2672 Query 153721 CTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA---AACCTAT 153777 | ||| | |||||||| ||| |||| || || || |||| |||| ||| |||| Sbjct 2671 CCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCA-- 2614 Query 153778 GCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACA 153837 || |||||| ||| ||| | | | |||| ||||| ||||||| | | ||||| Sbjct 2613 -CAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACA 2555 Query 153838 GTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCA 153897 | ||| ||||| || || | || || || |||||||| | || |||||||||| Sbjct 2554 GCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCA 2495 Query 153898 GCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGT 153957 | |||||| || | || | || || ||||||||||||||| | ||| || |||| Sbjct 2494 GGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGT 2435 Query 153958 ACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG-CACG 154016 | | | |||||| || | || ||| ||| |||| || |||| ||| || Sbjct 2434 AGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACT 2375 Query 154017 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCAC----CTTTACGCTT 154072 | | | | || | ||||| ||||| | |||| ||| | || | | || | || Sbjct 2374 CGA-ATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG-TT 2317 Query 154073 TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 ||||||||||| |||| || || |||||||| | ||||||| ||| || ||| || Sbjct 2316 GCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCC 2257 Query 154133 GCTTGCGGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACG 154190 | ||| | ||||| || || | ||| | | || ||||| | |||||| Sbjct 2256 GTTTGAAATACCGTTTGTGCCGGA--GATGTATGTTCCCTTCGCGCGGATGCAGTGCACG 2199 Query 154191 TTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGC-CCAGCGTCCTGT 154248 || | |||||||| ||| | ||||||| || ||||||| | || ||| || || Sbjct 2198 TTCAGCCCAATGCCACCGGCCGACTTTGAAAT--CAGCGCACATTGCTTCAGAGTATCGT 2141 Query 154249 AGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAA 154308 | || || || |||||||| || | | |||| ||||| ||| | | || || Sbjct 2140 AAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCC 2081 Query 154309 TGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA-CAGTTTTTGGCTCATC 154367 |||| |||| | ||| | ||| || ||||| ||||| || || | || | Sbjct 2080 GCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAG-ACAGC 2022 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | ||||||||||| || | ||||| | || ||||| ||||||| ||||||||| Sbjct 2021 AGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGC 1962 Query 154428 ATGAGCATGTGCTGCGGACGTTC 154450 || ||||| ||||| || || || Sbjct 1961 ATCAGCATATGCTGTGGTCGCTC 1939 >seq22281 Length=11977 Score = 111 bits (122), Expect = 2e-19 Identities = 293/437 (67%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363 ||| | ||||| |||| ||| |||||||||| || |||||| | ||||| | || Sbjct 3304 CTGTTTAATGCCATCGAA-ACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAA 3246 Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 |||||| ||| | | || | | | ||||| | ||||| |||||| ||||| Sbjct 3245 CTGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGA 3186 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 || | || || ||||||||| || |||| || | | || | | ||| | || Sbjct 3185 AGGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGAT 3126 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| || || || ||| |||||| |||| |||||||||||||| |||||| ||||| Sbjct 3125 GCCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTT 3066 Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGA 52602 || ||||| | |||| | ||| | ||| | || ||| | || | || Sbjct 3065 CGCCTGCCTGATGTTCAAGTATCTGGTG-CAGAAGCCGTCGA--AGGAGCGCGTGACGGA 3009 Query 52603 GCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCG 52662 ||| | || ||||| | ||||| ||||||| || ||| || ||||| || | Sbjct 3008 -CATTATTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGTTG 2950 Query 52663 AGCTGCTGGGCATGAAC-GCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGT 52721 | |||| ||||||||| ||| | |||| ||||||||||||||||||| |||||| Sbjct 2949 ACATGCTTGGCATGAACTGCG-ATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGT 2891 Query 52722 CTGTTGGTGCAGCTCGG 52738 || || | |||| || Sbjct 2890 TTGCTGCTCGAGCTGGG 2874 >seq29242 Length=5648 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| | ||| | | | || ||||| |||||||| ||||| | Sbjct 5416 CCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGAC 5475 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || || || |||| | |||| |||||||| || || || || Sbjct 5476 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 5535 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| | || | || | | || | || |||| | ||| || Sbjct 5536 ATTCCCTCCTTATCC-TGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAAC 5594 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || || ||||| ||||| |||||||||||||| Sbjct 5595 CTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq9735 Length=15595 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| || | ||| | | | || ||||| ||||| ||||||||| | ||| || Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| | |||| |||||||| || || ||||| || ||||| || Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | ||||| | | ||| ||||| | || | Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || || || || ||||| || |||||||||||| Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496074012589680