Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq25975 192 6e-44 seq9735 136 4e-27 seq24704 131 2e-25 seq3879 122 8e-23 seq29242 100 3e-16 seq734 98.7 9e-16 >seq25975 Length=7706 Score = 192 bits (212), Expect = 6e-44 Identities = 1150/1806 (64%), Gaps = 75/1806 (4%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||| || || ||||| |||| | ||||||| || ||||||| ||| |||||||| || Sbjct 3705 GTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCAGT 3646 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGT 145836 || | | | |||| ||| || || || || || | |||| || ||||| Sbjct 3645 TTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCG--TAGTTGGGT 3588 Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896 || ||||| | ||| | ||||| |||||| || || | | | || || || ||| Sbjct 3587 TCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCC 3528 Query 145897 ATGTCTATCATGCAC--TTTGATTTA-ATTTCCCATGCGGTTTTAAAGAGATCCTTGACG 145953 || | | |||||| ||| | | | || |||||| | ||||| | ||||| | Sbjct 3527 ATTT---TGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATT 3471 Query 145954 TGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGC 146013 | || || || ||||| || || | || ||||| | | || || | ||| | Sbjct 3470 TCTTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTC 3411 Query 146014 AATTCTGGAGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACC 146073 | || || | | || || || ||| | ||||| ||||| |||||| Sbjct 3410 ATATCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACC 3351 Query 146074 TGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGAC 146133 |||||||| || | || ||||| || || ||||| ||| | ||||||||||| Sbjct 3350 TGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGAT 3291 Query 146134 TCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAG 146193 || ||||| || || || || || |||| ||| || ||||| |||| ||||| || Sbjct 3290 TCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAA 3231 Query 146194 TTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGATC 146252 || | | ||||| ||| | || |||||| | | ||||| ||||||| | || Sbjct 3230 TTGCGGATACCGTG-CTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACA---GCTC 3175 Query 146253 CGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCTATTCTC 146312 || || | | || | | ||||| |||| |||| || || ||| ||| Sbjct 3174 AGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTC 3115 Query 146313 GTACGATTCATAAGGACCGT--CGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAG--CCG 146368 ||||| ||| || || || | ||| | ||||| || |||||||||||||| | ||| Sbjct 3114 GTACGTTTCGTACGGTCCATCACGAGC--GGCCAACTCACAGCTAGCTTCCAGTGCTCCG 3057 Query 146369 AAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAG 146427 ||| || ||||| || || ||| | | ||| || ||||||||||| ||||| Sbjct 3056 AAA--TAGATGGTTTCGAATAT-TTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTA- 3001 Query 146428 GGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCG 146486 ||||| || | | | || || ||||| | ||||| | || | ||| | ||| || Sbjct 3000 CGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCG 2941 Query 146487 GTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCTT 146546 ||| | |||| | | ||| ||| ||||||| |||| || |||||||| Sbjct 2940 GTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTT 2881 Query 146547 GTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAATGTTTT 146606 ||| ||||| ||| || || || | | |||||| | | | ||| | ||||| Sbjct 2880 GTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATACGTTTT 2821 Query 146607 AGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTC 146666 | || || || || |||| | || || ||||||| || || || || || Sbjct 2820 ATCTT---GCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTC 2764 Query 146667 GTCCTT-GTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCA 146725 |||||| | || |||||| |||||| |||| ||| |||||| || || ||| | || | Sbjct 2763 GTCCTTCGACG-AATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGA 2705 Query 146726 AAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGG 146785 ||| | || ||||| ||||| | |||||||| |||||||| ||| | || | Sbjct 2704 CATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCG 2645 Query 146786 TTTCGACATTGGTCTCGACGAT---GAATCTAAACAAATCTCTG-GCCTTTACTTGTCTT 146841 |||| || | | ||||| ||| ||| | |||| || ||| || || || |||| Sbjct 2644 TTTCCACCTGCGACTCGATGATCGCGAACC---ACAAGTC-CTGTGCTTTGACCTGTC-- 2591 Query 146842 TCGTACAG-TTTATTCTTT-TCGTATTTCTCGTACAATATTTCAAAACTAGAACCGTACT 146899 || || ||||| ||||| | ||||| | || || ||| || Sbjct 2590 GAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACG 2531 Query 146900 CGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCA 146959 || || |||||| | | | ||||| | ||| ||| || |||| ||| || Sbjct 2530 TATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCA 2471 Query 146960 CGCGTTCCATAAACAAATCGGGAATCCAAAG-GCCCAGCATCAAGTCGCGAGCCTTGGCG 147018 | || | ||| |||| ||| || ||||| || || || | || |||||| || | | Sbjct 2470 CACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAG-AACATGTCGCGGGCACGGACC 2412 Query 147019 TCCTCGGAGCCCATGTTGCGTCTCAAG-TTGAGGACATCGTAAATTTCCGGATGCCAAGG 147077 || || ||| |||| ||| || | ||| | ||| | | || |||||| || Sbjct 2411 TCTTCCTTGCCAGTGTT-TTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGG 2353 Query 147078 CTCCACGTATGCGGCGAGTGC-----GCCTTTTCGCTTACCGCCCTGATCGACGTGGCGC 147132 |||| || ||||| ||| ||||||| || ||||||||||| |||| || Sbjct 2352 TTCCAGATAGATGGCGAATGCTCCAGGCCTTTT--GTTGCCGCCCTGATCCACGTACCGT 2295 Query 147133 ACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGA------TTTTGTGGTG 147186 || | || ||| | || || | ||| | ||| | ||| || |||||| | Sbjct 2294 GCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCG 2235 Query 147187 CCGTTGTAT------TGAGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGA 147240 | ||||| | |||| || || |||||| ||||||| | || ||| || Sbjct 2234 GAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGAC 2175 Query 147241 TTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTG 147300 || ||||||| || | | | || || | ||| || || || ||||| || || Sbjct 2174 TTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGAC 2115 Query 147301 ATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTG 147360 ||| |||| ||||| ||| | | || || || ||| |||| ||||||| || Sbjct 2114 ATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACATGGTC 2055 Query 147361 GGGCTGGCGTGCGTGAA--CGTGCCCAGACTCATCAATTGATACGTTTCAATGGCGCT-C 147417 || |||||| || || | | |||| || || | ||||||||| || |||| | Sbjct 2054 GGTGAGGCGTGGGTAAAGTAGCGTTCAGA--CAGCAGATTATACGTTTCGAT--CGCTGC 1999 Query 147418 AT-AACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTC 147476 || | || || ||||| ||| | | ||||||||||| ||||| ||||| ||||| || Sbjct 1998 ATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGCTC 1939 Query 147477 CGCAAT 147482 |||| Sbjct 1938 AACAAT 1933 >seq9735 Length=15595 Score = 136 bits (150), Expect = 4e-27 Identities = 173/237 (73%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 126878 TATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTG 126937 |||||| | ||||| || | ||||| |||| ||| | || || || || ||||||||| Sbjct 4844 TATACT-CACCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTG 4786 Query 126938 TAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGA 126997 || ||| | |||||| ||| || ||||| || || || |||||| ||||||||| Sbjct 4785 TAGTCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGA 4726 Query 126998 TCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTA 127057 || ||||| ||||| ||||| ||| ||| || ||| | | |||| ||||||| | Sbjct 4725 TCTGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAA 4666 Query 127058 CTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||||| || | || | || |||||||| || ||||| || |||||||||||| Sbjct 4665 GGCTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609 >seq24704 Length=53625 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||||||| | || | ||||| ||| | ||||||||||| || || ||||| ||| Sbjct 37706 GCACCACCGCGCAGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCG 37647 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || |||||| ||| || ||||| || || ||| |||||| ||||||||||| || Sbjct 37646 GACAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGC 37587 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| ||| ||| | | |||| || |||| |||| Sbjct 37586 GGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCG 37527 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | || || || || || ||||| || || |||||||| Sbjct 37526 ACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477 >seq3879 Length=3897 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||||||| || || || ||| || ||||| || || Sbjct 3887 GTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCG 3828 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| ||||||||||| ||||| ||||||||||||||| ||| || ||| Sbjct 3827 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 3768 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| || | || | || ||||| ||||| ||| Sbjct 3767 ACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTT 3708 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 3707 TTCACGAAGATCTGCAT 3691 >seq29242 Length=5648 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | |||| ||| | || || || || ||||| || || || Sbjct 5415 TCCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGA 5474 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| ||| || ||||| ||||| || |||||| ||||||||||| || || Sbjct 5475 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGG 5534 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| || || ||||| | || | || || | ||| || Sbjct 5535 GATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAAC 5594 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || |||||||| ||||| |||||||||||||| Sbjct 5595 CTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq734 Length=4884 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||| ||| | || || || || || || || || || | Sbjct 11 CCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGAC 70 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| ||||| || |||||| ||||||||||| || || Sbjct 71 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 130 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| ||| || || ||||| | || | || || | ||| || Sbjct 131 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACC 190 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || |||||||||||||| |||||||||||||| Sbjct 191 TCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475320293952560