Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 277 2e-69
seq9735 95.1 1e-14
>seq25975
Length=7706
Score = 277 bits (306), Expect = 2e-69
Identities = 933/1441 (65%), Gaps = 50/1441 (3%)
Strand=Plus/Plus
Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975
|| |||||||| |||||||||||||| ||| | ||||| ||||||| |||| |
Sbjct 1948 CAGCATATGCTGATGCGCGTCGCTATCGGCATCCACGGTGAAAACATCGATGCAGCGATC 2007
Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035
||||| || || || ||||| || | || || ||||| || || |||| ||
Sbjct 2008 GAAACGTATAATCTGCTGTCTGAACGCTACTTTACCCACGCCTCACCGACCATGTTTGCA 2067
Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095
|| | ||| || ||||||| | ||||| |||||| |||| ||| || || || |||
Sbjct 2068 GCGGCTACGCAGCGGCCTCAGCTCTCTTCCTGTTTTCTGCTGACCATGTCTGATGATAGC 2127
Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155
|| ||||| || || ||| || | || ||| ||||||| || | | ||| |||
Sbjct 2128 ATTGAGGGTATTTACGATACTCTGAAGCAATGTGCGCTGATTTCAAAGTCGGCCGGTGGC 2187
Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGA 123215
|| || ||||||||||| | | | | |||| |||| |||| ||||
Sbjct 2188 ATTGGGCTGAACGTGCACTGCATCCGCGCGAAGGGAACATACATCTCCGGCACAAACGGT 2247
Query 123216 ATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGAC 123275
|| | ||| | | | |||||||| || ||||| || | | ||| |||| ||
Sbjct 2248 ATTTCAAACGGATTGGTGCCGATGCTGCGCGTGTACAACAATACGGCACGGTACGTGGAT 2307
Query 123276 CAGGGCGGCAAACGCAAAGGC-----GCGATGGCGATCTATCTAGAACCGTGGCACGTTG 123330
||||||||||| |||||| || | || |||||||| ||||||||||| | ||
Sbjct 2308 CAGGGCGGCAACA--AAAGGCCTGGAGCATTCGCCATCTATCTGGAACCGTGGCATGGTG 2365
Query 123331 ATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCG 123390
|||| | ||| ||| | || |||| |||| || |||||| |||||||
Sbjct 2366 ATGTATTCGAGTTTCTCGATCTAAAGAAAAACACTGGCAAGGAAGAGGTCCGTGCCCGCG 2425
Query 123391 ATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCG 123450
| |||| |||||| | ||| |||| ||| |||| ||| || || | | | |
Sbjct 2426 ACATGTTCTACGCTCTGTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAATGAAA 2485
Query 123451 TGTGGTCGCTCATGTGTCC---CGATCGGTGTCCCGGCTTG--AGCGACGTTTACGGCAA 123505
||||| || |||||||| |||| |||||||| || || |||| || |
Sbjct 2486 TGTGGAGCCTGATGTGTCCACACGAT---TGTCCCGGTCTGGCAGATACGTGG--GGTGA 2540
Query 123506 TCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCC 123565
|||| || || ||||| || |||||| || || || | |||||
Sbjct 2541 AGAGTTCGAGAAGCTGTACACGGGGTACGAGAAAGAGGGTCGCTTTATTCGACAGGTCAA 2600
Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACAT 123625
|||| || |||| || ||||| | || || ||||| || || |||||
Sbjct 2601 AGCACAGGACTTGTGGTTCGCGATCATCGAGTCGCAGGTGGAAACGGGCGTACCATACAT 2660
Query 123626 GCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATG 123685
||| ||||| || || ||||| | |||| |||||| || | ||||| || |||||
Sbjct 2661 GCTGTACAAGGATGCATGCAATCGTAAAAGTAATCAGCAGAATGTCGGAACCATTAAATG 2720
Query 123686 TAGTAATCTTTGCTCCGAAATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGT 123743
| || || ||| |||||||| | || || | ||| | || |||| || |||||
Sbjct 2721 TTCCAACCTGTGCACCGAAATTGTGGAGTATTCGTCGAAG--GACGAAGTAGCGGTGTGC 2778
Query 123744 AATTTGGCTTCGATTTGCGTGAA--TCGTTGCGTCG------AAAACGGCGCTTTTAATT 123795
||| |||| |||||| |||| | ||| | |||||| | | | ||
Sbjct 2779 AATCTGGCCTCGATTGCTTTGAACATGTTTGTAAAGCAAGATAAAACG----TATGATTT 2834
Query 123796 TCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAG---AATTTGAACAAAATTATCG 123852
| | || ||| || | | || | |||||| | ||| ||||||| || || |
Sbjct 2835 TACCAA-GCTGAAGGAAGTCGCTAAGA---TAGTAACGCGCAATCTGAACAAGATCATTG 2890
Query 123853 ATGTTAATTTTTATCCTTT---GGAGG--AAGCGCGTTTGTCTAATTTGAAACACAGACC 123907
|||| || | |||||| | ||||| |||||| || || || ||| ||||
Sbjct 2891 ATGTCAACTACTATCCTGTCCCGGAGGCTAAGCGC-----TCCAACATGCGCCACCGACC 2945
Query 123908 GGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGA 123967
|||| | || |||| || ||||||| ||||| | | ||||| ||||||||
Sbjct 2946 CATCGGTATAGGTGTTCAGGGAATGGCCGATGCGTTCATCTTAATGCGCTATCCGTACGA 3005
Query 123968 AAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTT 124027
|||||| || || | ||| || |||||| |||||| || |||| ||| || |
Sbjct 3006 AAGCGAGGAGGCTCAAAAGCTGAACCAACAAATATTCGAAACCATCTATTTCGGAGCACT 3065
Query 124028 GGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCC 124087
||| || ||||| || | || | | || ||||||||| |||| ||| || ||
Sbjct 3066 GGAAGCTAGCTGTGAGTTGGCCGCTCGTGATGGACCGTACGAAACGTACGAGGGTAGTCC 3125
Query 124088 GGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGA 124147
|| ||| || || |||||||||| |||||||| ||||| | ||||| |
Sbjct 3126 GGTGAGTAAGGGCATCCTGCAGTACGAAATGTGGAACAAGGAGCCGACTGAGCTGTGGAA 3185
Query 124148 CTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGC 124207
|||| | || || || ||| | | ||||||| | || || |||||| || ||||
Sbjct 3186 CTGGTCGGAGTTGAAGGAAAAAATAGCCAAGCACGGTATCCGCAATTCGCTGCTGTTGGC 3245
Query 124208 GTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTT 124267
||||||||||| | || || |||||| | || ||||| ||||| |||||||| |
Sbjct 3246 CCCGATGCCGACGGCTTCGACAGCCCAAATTCTTGGCAACAATGAATCGTTCGAGCCCTA 3305
Query 124268 CACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCA 124327
||| || | ||| |||| ||| || | || || ||||| ||| |||| || ||
Sbjct 3306 CACGTCGAACGTATACAATAGACGCGTGCTATCGGGTGAGTTTCAGGTGGTAAACCACCA 3365
Query 124328 T 124328
|
Sbjct 3366 T 3366
>seq9735
Length=15595
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || || ||||| || || |||||||| || ||||| || ||| |
Sbjct 4836 CCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAG 4777
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || | ||| |||| || || || || | |||| || ||||| || || |||
Sbjct 4776 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGA 4717
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|||||||| ||||| || || || || | || | ||||| |||| ||||||
Sbjct 4716 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 4657
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || | || |||||||| || ||||| || ||||| |||||
Sbjct 4656 TCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451831613935240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |