Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq25975 277 2e-69 seq9735 95.1 1e-14 >seq25975 Length=7706 Score = 277 bits (306), Expect = 2e-69 Identities = 933/1441 (65%), Gaps = 50/1441 (3%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 || |||||||| |||||||||||||| ||| | ||||| ||||||| |||| | Sbjct 1948 CAGCATATGCTGATGCGCGTCGCTATCGGCATCCACGGTGAAAACATCGATGCAGCGATC 2007 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 ||||| || || || ||||| || | || || ||||| || || |||| || Sbjct 2008 GAAACGTATAATCTGCTGTCTGAACGCTACTTTACCCACGCCTCACCGACCATGTTTGCA 2067 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 || | ||| || ||||||| | ||||| |||||| |||| ||| || || || ||| Sbjct 2068 GCGGCTACGCAGCGGCCTCAGCTCTCTTCCTGTTTTCTGCTGACCATGTCTGATGATAGC 2127 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155 || ||||| || || ||| || | || ||| ||||||| || | | ||| ||| Sbjct 2128 ATTGAGGGTATTTACGATACTCTGAAGCAATGTGCGCTGATTTCAAAGTCGGCCGGTGGC 2187 Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGA 123215 || || ||||||||||| | | | | |||| |||| |||| |||| Sbjct 2188 ATTGGGCTGAACGTGCACTGCATCCGCGCGAAGGGAACATACATCTCCGGCACAAACGGT 2247 Query 123216 ATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGAC 123275 || | ||| | | | |||||||| || ||||| || | | ||| |||| || Sbjct 2248 ATTTCAAACGGATTGGTGCCGATGCTGCGCGTGTACAACAATACGGCACGGTACGTGGAT 2307 Query 123276 CAGGGCGGCAAACGCAAAGGC-----GCGATGGCGATCTATCTAGAACCGTGGCACGTTG 123330 ||||||||||| |||||| || | || |||||||| ||||||||||| | || Sbjct 2308 CAGGGCGGCAACA--AAAGGCCTGGAGCATTCGCCATCTATCTGGAACCGTGGCATGGTG 2365 Query 123331 ATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCG 123390 |||| | ||| ||| | || |||| |||| || |||||| ||||||| Sbjct 2366 ATGTATTCGAGTTTCTCGATCTAAAGAAAAACACTGGCAAGGAAGAGGTCCGTGCCCGCG 2425 Query 123391 ATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCG 123450 | |||| |||||| | ||| |||| ||| |||| ||| || || | | | | Sbjct 2426 ACATGTTCTACGCTCTGTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAATGAAA 2485 Query 123451 TGTGGTCGCTCATGTGTCC---CGATCGGTGTCCCGGCTTG--AGCGACGTTTACGGCAA 123505 ||||| || |||||||| |||| |||||||| || || |||| || | Sbjct 2486 TGTGGAGCCTGATGTGTCCACACGAT---TGTCCCGGTCTGGCAGATACGTGG--GGTGA 2540 Query 123506 TCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCC 123565 |||| || || ||||| || |||||| || || || | ||||| Sbjct 2541 AGAGTTCGAGAAGCTGTACACGGGGTACGAGAAAGAGGGTCGCTTTATTCGACAGGTCAA 2600 Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACAT 123625 |||| || |||| || ||||| | || || ||||| || || ||||| Sbjct 2601 AGCACAGGACTTGTGGTTCGCGATCATCGAGTCGCAGGTGGAAACGGGCGTACCATACAT 2660 Query 123626 GCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATG 123685 ||| ||||| || || ||||| | |||| |||||| || | ||||| || ||||| Sbjct 2661 GCTGTACAAGGATGCATGCAATCGTAAAAGTAATCAGCAGAATGTCGGAACCATTAAATG 2720 Query 123686 TAGTAATCTTTGCTCCGAAATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGT 123743 | || || ||| |||||||| | || || | ||| | || |||| || ||||| Sbjct 2721 TTCCAACCTGTGCACCGAAATTGTGGAGTATTCGTCGAAG--GACGAAGTAGCGGTGTGC 2778 Query 123744 AATTTGGCTTCGATTTGCGTGAA--TCGTTGCGTCG------AAAACGGCGCTTTTAATT 123795 ||| |||| |||||| |||| | ||| | |||||| | | | || Sbjct 2779 AATCTGGCCTCGATTGCTTTGAACATGTTTGTAAAGCAAGATAAAACG----TATGATTT 2834 Query 123796 TCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAG---AATTTGAACAAAATTATCG 123852 | | || ||| || | | || | |||||| | ||| ||||||| || || | Sbjct 2835 TACCAA-GCTGAAGGAAGTCGCTAAGA---TAGTAACGCGCAATCTGAACAAGATCATTG 2890 Query 123853 ATGTTAATTTTTATCCTTT---GGAGG--AAGCGCGTTTGTCTAATTTGAAACACAGACC 123907 |||| || | |||||| | ||||| |||||| || || || ||| |||| Sbjct 2891 ATGTCAACTACTATCCTGTCCCGGAGGCTAAGCGC-----TCCAACATGCGCCACCGACC 2945 Query 123908 GGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGA 123967 |||| | || |||| || ||||||| ||||| | | ||||| |||||||| Sbjct 2946 CATCGGTATAGGTGTTCAGGGAATGGCCGATGCGTTCATCTTAATGCGCTATCCGTACGA 3005 Query 123968 AAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTT 124027 |||||| || || | ||| || |||||| |||||| || |||| ||| || | Sbjct 3006 AAGCGAGGAGGCTCAAAAGCTGAACCAACAAATATTCGAAACCATCTATTTCGGAGCACT 3065 Query 124028 GGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCC 124087 ||| || ||||| || | || | | || ||||||||| |||| ||| || || Sbjct 3066 GGAAGCTAGCTGTGAGTTGGCCGCTCGTGATGGACCGTACGAAACGTACGAGGGTAGTCC 3125 Query 124088 GGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGA 124147 || ||| || || |||||||||| |||||||| ||||| | ||||| | Sbjct 3126 GGTGAGTAAGGGCATCCTGCAGTACGAAATGTGGAACAAGGAGCCGACTGAGCTGTGGAA 3185 Query 124148 CTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGC 124207 |||| | || || || ||| | | ||||||| | || || |||||| || |||| Sbjct 3186 CTGGTCGGAGTTGAAGGAAAAAATAGCCAAGCACGGTATCCGCAATTCGCTGCTGTTGGC 3245 Query 124208 GTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTT 124267 ||||||||||| | || || |||||| | || ||||| ||||| |||||||| | Sbjct 3246 CCCGATGCCGACGGCTTCGACAGCCCAAATTCTTGGCAACAATGAATCGTTCGAGCCCTA 3305 Query 124268 CACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCA 124327 ||| || | ||| |||| ||| || | || || ||||| ||| |||| || || Sbjct 3306 CACGTCGAACGTATACAATAGACGCGTGCTATCGGGTGAGTTTCAGGTGGTAAACCACCA 3365 Query 124328 T 124328 | Sbjct 3366 T 3366 >seq9735 Length=15595 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || | || || ||||| || || |||||||| || ||||| || ||| | Sbjct 4836 CCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAG 4777 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| |||| || || || || | |||| || ||||| || || ||| Sbjct 4776 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGA 4717 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 |||||||| ||||| || || || || | || | ||||| |||| |||||| Sbjct 4716 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 4657 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | || |||||||| || ||||| || ||||| ||||| Sbjct 4656 TCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451831613935240