Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq22281 181 2e-40
seq25975 143 4e-29
>seq22281
Length=11977
Score = 181 bits (200), Expect = 2e-40
Identities = 298/424 (70%), Gaps = 7/424 (2%)
Strand=Plus/Plus
Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803
|||||| | || |||||||| |||||||| || | ||||| | || ||||| || || |
Sbjct 2885 CAGCAAACGATCAGCCACAAACTCGATGTA-CTGCGACATCAGATCGCAGTTCATGCCAA 2943
Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863
||| |||||| || || | || || ||||||| ||| ||| | ||||| ||| |
Sbjct 2944 GCATGTCAACGGGCAGTGCCTTCGTCAAGAACTCCTGCTCGATCACAACCGCATCGCGAA 3003
Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
||| | || || || || | | |||||| || | | | ||| |||| ||||
Sbjct 3004 TAATGTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCA---GATACTTGAACATCAGGC 3060
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| || |||||||||||||| || ||||| || || || | |||||| || | | |||| |
Sbjct 3061 AGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTC 3120
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
||||||| | |||||| |||||||| ||||||| || || ||||| || ||||
Sbjct 3121 CCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGA 3180
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103
| || || ||||| || || ||||||| | |||||| || || || || |
Sbjct 3181 TACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCTGGAGA 3240
Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTA 160162
|||| || ||||| ||||||||||| | |||||||| ||| |||| ||| |||
Sbjct 3241 TCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCA-GCGTTTCGATGGCATTA 3299
Query 160163 AACA 160166
||||
Sbjct 3300 AACA 3303
>seq25975
Length=7706
Score = 143 bits (158), Expect = 4e-29
Identities = 403/610 (66%), Gaps = 8/610 (1%)
Strand=Plus/Minus
Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892
|||||| ||||||||||| ||||| || || || ||||| ||| || | | || ||| ||
Sbjct 3714 CTTCGTTTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATA 3655
Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952
|||||| || || | ||| | | ||||||||| | || || || | ||| || |
Sbjct 3654 CATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTA 3595
Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGAT 204011
|||||| || || | |||||| || | || || || ||||| ||| || || ||||
Sbjct 3594 GTTGGGTTCCGCGACGTGAATATTGAACGATTGCGACTGATCGAT-AAACGCACCGCGAT 3536
Query 204012 CTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTC 204071
| || ||||| ||||| || ||| || |||||||| ||||| ||| | | || |
Sbjct 3535 CCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGC 3476
Query 204072 TGGTGTGTTGAGGCACA-TCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCT 204129
| | ||| || | | ||| | | | || || || || |||| | || | |||
Sbjct 3475 GAATTTCTTGCGGGATAGTCT--CAATCTTTTGAATTGATCCATTGTTCGACA-GAATCT 3419
Query 204130 C-ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGT 204188
| || || | || |||| | |||| || |||| ||| ||| || ||| |||
Sbjct 3418 CGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGT 3359
Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248
| | | |||||| || || || ||||| | || || | | ||| ||| | || |
Sbjct 3358 TTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCT 3299
Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308
|||||| || |||||||| | ||| || || || ||||| ||||| || |||| |
Sbjct 3298 CGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACA 3239
Query 204309 GCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA 204368
|||| || ||||| | ||||| || | | ||||| | ||||| ||
Sbjct 3238 GCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACA 3179
Query 204369 TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGC 204428
| || | || | | | |||||| ||| |||| | |||||| | ||| || || || |
Sbjct 3178 GCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTAC 3119
Query 204429 CCTTGTACGT 204438
||| ||||||
Sbjct 3118 CCTCGTACGT 3109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794853349146640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |