Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq22281 181 2e-40 seq25975 143 4e-29 >seq22281 Length=11977 Score = 181 bits (200), Expect = 2e-40 Identities = 298/424 (70%), Gaps = 7/424 (2%) Strand=Plus/Plus Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803 |||||| | || |||||||| |||||||| || | ||||| | || ||||| || || | Sbjct 2885 CAGCAAACGATCAGCCACAAACTCGATGTA-CTGCGACATCAGATCGCAGTTCATGCCAA 2943 Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863 ||| |||||| || || | || || ||||||| ||| ||| | ||||| ||| | Sbjct 2944 GCATGTCAACGGGCAGTGCCTTCGTCAAGAACTCCTGCTCGATCACAACCGCATCGCGAA 3003 Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 ||| | || || || || | | |||||| || | | | ||| |||| |||| Sbjct 3004 TAATGTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCA---GATACTTGAACATCAGGC 3060 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 | || |||||||||||||| || ||||| || || || | |||||| || | | |||| | Sbjct 3061 AGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTC 3120 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 ||||||| | |||||| |||||||| ||||||| || || ||||| || |||| Sbjct 3121 CCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGA 3180 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103 | || || ||||| || || ||||||| | |||||| || || || || | Sbjct 3181 TACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCTGGAGA 3240 Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTA 160162 |||| || ||||| ||||||||||| | |||||||| ||| |||| ||| ||| Sbjct 3241 TCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCA-GCGTTTCGATGGCATTA 3299 Query 160163 AACA 160166 |||| Sbjct 3300 AACA 3303 >seq25975 Length=7706 Score = 143 bits (158), Expect = 4e-29 Identities = 403/610 (66%), Gaps = 8/610 (1%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||| ||||||||||| ||||| || || || ||||| ||| || | | || ||| || Sbjct 3714 CTTCGTTTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATA 3655 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 |||||| || || | ||| | | ||||||||| | || || || | ||| || | Sbjct 3654 CATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTA 3595 Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGAT 204011 |||||| || || | |||||| || | || || || ||||| ||| || || |||| Sbjct 3594 GTTGGGTTCCGCGACGTGAATATTGAACGATTGCGACTGATCGAT-AAACGCACCGCGAT 3536 Query 204012 CTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTC 204071 | || ||||| ||||| || ||| || |||||||| ||||| ||| | | || | Sbjct 3535 CCGCTGCCATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGC 3476 Query 204072 TGGTGTGTTGAGGCACA-TCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCT 204129 | | ||| || | | ||| | | | || || || || |||| | || | ||| Sbjct 3475 GAATTTCTTGCGGGATAGTCT--CAATCTTTTGAATTGATCCATTGTTCGACA-GAATCT 3419 Query 204130 C-ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGT 204188 | || || | || |||| | |||| || |||| ||| ||| || ||| ||| Sbjct 3418 CGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGT 3359 Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 | | | |||||| || || || ||||| | || || | | ||| ||| | || | Sbjct 3358 TTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCT 3299 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 |||||| || |||||||| | ||| || || || ||||| ||||| || |||| | Sbjct 3298 CGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACA 3239 Query 204309 GCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA 204368 |||| || ||||| | ||||| || | | ||||| | ||||| || Sbjct 3238 GCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACA 3179 Query 204369 TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGC 204428 | || | || | | | |||||| ||| |||| | |||||| | ||| || || || | Sbjct 3178 GCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTAC 3119 Query 204429 CCTTGTACGT 204438 ||| |||||| Sbjct 3118 CCTCGTACGT 3109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794853349146640