Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3879 134 2e-26 seq24704 127 2e-24 seq9735 118 1e-21 seq29242 98.7 1e-15 >seq3879 Length=3897 Score = 134 bits (148), Expect = 2e-26 Identities = 154/206 (75%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 46391 TGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGC 46450 ||||| || |||||| ||||| ||||| ||||| | ||| || | || || |||||| Sbjct 3893 TGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGC 3834 Query 46451 TTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTC 46510 || |||||||| ||||| |||||||| || | || | || |||||||||| |||||| Sbjct 3833 TTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTG 3774 Query 46511 TTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTTTTGCCC 46567 ||| | || | | |||||| |||| || || |||| |||||||| ||||| Sbjct 3773 GCCTTCACGTTCTCGATCGTGTC---CGATGGCTCGACCTCCAAAGTGATGGTCTTGCCA 3717 Query 46568 GTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||||| || ||||| ||||| Sbjct 3716 GTCAGCGTTTTCACGAAGATCTGCAT 3691 >seq24704 Length=53625 Score = 127 bits (140), Expect = 2e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||||||| | ||| ||| || ||||| ||||||||||| || ||||| | Sbjct 37692 ACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCC 37633 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| |||||||| |||| |||||||| || | ||| | | |||||| Sbjct 37632 ATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTT 37573 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||||| ||| | || | | ||| || | || || || | || || Sbjct 37572 GTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAAT 37513 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 ||| || ||||| || ||||| || ||||| ||||| ||| || Sbjct 37512 GGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAAC 37470 >seq9735 Length=15595 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||||||| | || ||||| || |||||||||||||| |||||||| | Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||||||||| || |||| |||||||| || | || | || ||||| Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | || | | |||||| | || || || | |||||| Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || ||||| || |||||||| || || || ||||| || Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTT 4607 >seq29242 Length=5648 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||| | || ||||| || || || ||||| || || ||||| | || || Sbjct 5434 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 5493 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| ||||| || |||| |||||||| || | || | | |||||| ||| Sbjct 5494 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 5553 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| || | | ||| ||| | || || || | |||||||| || Sbjct 5554 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTT 5613 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||||||||| ||||| || ||||| Sbjct 5614 CCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565023828437880