Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq22281 239 4e-58
seq24704 122 9e-23
seq9735 120 3e-22
seq3879 98.7 1e-15
>seq22281
Length=11977
Score = 239 bits (264), Expect = 4e-58
Identities = 312/429 (73%), Gaps = 2/429 (0%)
Strand=Plus/Plus
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770
||| |||| |||| | || ||||| ||||||||||| |||||||| ||||| ||
Sbjct 2876 CAGCTCGAGCAGCAAACGATCAGCCACAAACTCGATGTACTGCGACATCAGATCGCAGTT 2935
Query 132771 AAGTCCCAGCAGACGCACCGGCAGCG-CTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829
| || |||| || ||||| | ||||| |||| | |||||||| | ||||
Sbjct 2936 CATGCCAAGCATGTCAACGGGCAGTGCCTTCGTCAAGAACTC-CTGCTCGATCACAACCG 2994
Query 132830 CGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACA 132889
| ||| | || ||| | |||||| || |||| ||||||| || ||||||||
Sbjct 2995 CATCGCGAATAATGTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACA 3054
Query 132890 TCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAG 132949
||| ||| || |||||||| |||| || ||||| | ||||| || ||||| ||| |
Sbjct 3055 TCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGG 3114
Query 132950 TCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAA 133009
| | || ||||| ||||| || || |||||||| || |||| ||||| ||||| |
Sbjct 3115 TGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGA 3174
Query 133010 AGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGC 133069
|||||| || |||||||| ||||||||||| | ||||| ||||| | || | ||||
Sbjct 3175 AGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGC 3234
Query 133070 TGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGG 133129
||| ||||||| |||||||| || ||||| | || |||||||||| |||||||||||
Sbjct 3235 TGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGG 3294
Query 133130 CGTTCAACA 133138
| || ||||
Sbjct 3295 CATTAAACA 3303
Score = 149 bits (164), Expect = 6e-31
Identities = 201/275 (73%), Gaps = 4/275 (1%)
Strand=Plus/Plus
Query 133155 CGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214
|||| ||| | ||| |||||||| || || ||||| || ||| ||||| |||||
Sbjct 3406 CGAGTCACGGATGTAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCAT 3465
Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-C 133273
|| || || || ||||| || || || || || ||||| || || || || ||| |
Sbjct 3466 CGCAATCTGGAACCCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTG-GCTAAAGC 3524
Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333
| || |||||||| ||||| |||||||| ||| ||||| || ||||| ||||||||
Sbjct 3525 GTTCCACCAGATTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGG 3584
Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGC-TCCCAGTCGCGCGTGTCCTTGGACAGG 133392
||||| || || ||| | |||| |||| |||||||| | | |||||||||||
Sbjct 3585 AAATGAAGTGACGTTCGCTCGGTTTCA-GCGCATCCCAGTCCTTCATATCCTTGGACAGA 3643
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
|| |||||||| || ||||| ||||| ||||| ||
Sbjct 3644 TCAACCTCCTCCACCGTCCAGAACGAAGCCTCCGC 3678
>seq24704
Length=53625
Score = 122 bits (134), Expect = 9e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| ||||| |||||||| || ||||| ||| | || |||||| ||
Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359
| || | | | | | || | || |||| ||||| |||||||| ||||||| |
Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAAT-CCCGCCGGA 37592
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| || || | ||| || || |||||||| || | ||||| || ||||||
Sbjct 37593 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTA 37652
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| || || | || || ||| ||||||| ||| || | || ||
Sbjct 37653 CAACATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGG 37703
>seq9735
Length=15595
Score = 120 bits (132), Expect = 3e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||||||||| ||||| |||||||| | || |||||| |
Sbjct 4606 AAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 4665
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||| | | | | || | || |||| || || || || ||||| | ||
Sbjct 4666 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGA 4725
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| || || | || ||||| |||||||| || | ||||| ||| ||||||
Sbjct 4726 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 4785
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| || || |||||| |||| || ||| |||| |||||
Sbjct 4786 CAATATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCG 4824
>seq3879
Length=3897
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| |||||||| || ||||| |||||||| | || |||||| | |
Sbjct 3691 ATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCG 3750
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| ||||| ||||| ||||| | || ||
Sbjct 3751 GACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCA 3809
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||| || || |||||||| || | || || | ||| |||||
Sbjct 3810 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACAA 3869
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTG 38450
|||||| ||||| |||| |||| |||
Sbjct 3870 CATCCAGAAGGAGTCGACCTTGCACTTG 3897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499982928152960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |