Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq22281 239 4e-58 seq24704 122 9e-23 seq9735 120 3e-22 seq3879 98.7 1e-15 >seq22281 Length=11977 Score = 239 bits (264), Expect = 4e-58 Identities = 312/429 (73%), Gaps = 2/429 (0%) Strand=Plus/Plus Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| |||| |||| | || ||||| ||||||||||| |||||||| ||||| || Sbjct 2876 CAGCTCGAGCAGCAAACGATCAGCCACAAACTCGATGTACTGCGACATCAGATCGCAGTT 2935 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCG-CTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829 | || |||| || ||||| | ||||| |||| | |||||||| | |||| Sbjct 2936 CATGCCAAGCATGTCAACGGGCAGTGCCTTCGTCAAGAACTC-CTGCTCGATCACAACCG 2994 Query 132830 CGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACA 132889 | ||| | || ||| | |||||| || |||| ||||||| || |||||||| Sbjct 2995 CATCGCGAATAATGTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGAACA 3054 Query 132890 TCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAG 132949 ||| ||| || |||||||| |||| || ||||| | ||||| || ||||| ||| | Sbjct 3055 TCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGG 3114 Query 132950 TCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAA 133009 | | || ||||| ||||| || || |||||||| || |||| ||||| ||||| | Sbjct 3115 TGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGA 3174 Query 133010 AGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGC 133069 |||||| || |||||||| ||||||||||| | ||||| ||||| | || | |||| Sbjct 3175 AGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGC 3234 Query 133070 TGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGG 133129 ||| ||||||| |||||||| || ||||| | || |||||||||| ||||||||||| Sbjct 3235 TGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGG 3294 Query 133130 CGTTCAACA 133138 | || |||| Sbjct 3295 CATTAAACA 3303 Score = 149 bits (164), Expect = 6e-31 Identities = 201/275 (73%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 133155 CGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 |||| ||| | ||| |||||||| || || ||||| || ||| ||||| ||||| Sbjct 3406 CGAGTCACGGATGTAAGTGTCGATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCAT 3465 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-C 133273 || || || || ||||| || || || || || ||||| || || || || ||| | Sbjct 3466 CGCAATCTGGAACCCGTAGAAACAGCGTGCTTCCGTTACCTGTACCTCCTG-GCTAAAGC 3524 Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333 | || |||||||| ||||| |||||||| ||| ||||| || ||||| |||||||| Sbjct 3525 GTTCCACCAGATTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGG 3584 Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGC-TCCCAGTCGCGCGTGTCCTTGGACAGG 133392 ||||| || || ||| | |||| |||| |||||||| | | ||||||||||| Sbjct 3585 AAATGAAGTGACGTTCGCTCGGTTTCA-GCGCATCCCAGTCCTTCATATCCTTGGACAGA 3643 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || |||||||| || ||||| ||||| ||||| || Sbjct 3644 TCAACCTCCTCCACCGTCCAGAACGAAGCCTCCGC 3678 >seq24704 Length=53625 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| |||||||| || ||||| ||| | || |||||| || Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 | || | | | | | || | || |||| ||||| |||||||| ||||||| | Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAAT-CCCGCCGGA 37592 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| || || |||||||| || | ||||| || |||||| Sbjct 37593 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTA 37652 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| || || | || || ||| ||||||| ||| || | || || Sbjct 37653 CAACATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGG 37703 >seq9735 Length=15595 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||||||||| ||||| |||||||| | || |||||| | Sbjct 4606 AAACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 4665 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | || | || |||| || || || || ||||| | || Sbjct 4666 TTCGGACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGA 4725 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | || ||||| |||||||| || | ||||| ||| |||||| Sbjct 4726 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 4785 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || || |||||| |||| || ||| |||| ||||| Sbjct 4786 CAATATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCG 4824 >seq3879 Length=3897 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| |||||||| || ||||| |||||||| | || |||||| | | Sbjct 3691 ATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCG 3750 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | || || Sbjct 3751 GACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCA 3809 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || |||||||| || | || || | ||| ||||| Sbjct 3810 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACAA 3869 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTG 38450 |||||| ||||| |||| |||| ||| Sbjct 3870 CATCCAGAAGGAGTCGACCTTGCACTTG 3897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499982928152960