Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 140 4e-28
seq24817 111 2e-19
seq8435 93.3 5e-14
>seq25975
Length=7706
Score = 140 bits (154), Expect = 4e-28
Identities = 957/1524 (63%), Gaps = 42/1524 (3%)
Strand=Plus/Minus
Query 109506 CGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC-TTTT 109564
||| || ||||||||||| || ||| ||||| || ||||| | |||| ||| ||||
Sbjct 3567 CGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATG---CACGTTTT 3511
Query 109565 GGCTAA--TTTCCCAGACAGTCTTGTACAAATTCTTGATATCAT-CGGGAATGTCCACGA 109621
|| | | ||||| || || ||||| | || || || | ||||| ||| | |
Sbjct 3510 CACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCT-CAA 3452
Query 109622 TGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGA----CCAG 109677
| |||||||| || ||| ||| || | || ||| || | |||| |||
Sbjct 3451 TCTTTTGAATTGATCCATTG---TTCGACAGAATCTCGTTCTTCA-TATCGAGATCCCAT 3396
Query 109678 AGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCA 109737
| || | || | ||||| | | ||||| | ||| ||||| ||| ||||| |
Sbjct 3395 AATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGAT 3336
Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797
|| ||||| ||| | ||| | ||||||||| ||||| | ||||||||||| ||
Sbjct 3335 AGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGA 3276
Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC---C 109854
||||| || || ||||| || ||||| || |||| || || || |||| ||| |
Sbjct 3275 ATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGC 3216
Query 109855 TTCG-TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTC 109913
|| | | ||| | ||| | | || || || || || | | | |||
Sbjct 3215 TTGGCTATTTTTTCCTTCA---ACTCCGACCAGTTCC-----ACAGCTCAGTC--GGCTC 3166
Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973
| |||||| || || || | |||| | | ||| ||||| | | | ||
Sbjct 3165 CTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTCGTACGTTTC 3106
Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGT 110033
||||| || ||| |||||||||| | ||| || ||||| | ||| || ||
Sbjct 3105 GTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGT 3046
Query 110034 CTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGA-AGACCACAAA 110092
|| || || || |||| ||| ||| || | ||| | ||| || || ||
Sbjct 3045 TTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAA 2986
Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152
|| | ||| |||| || | ||||||||||| | ||| ||||| || || |||||| |
Sbjct 2985 GA-TGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGG 2927
Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212
|||| ||| || || || ||||| || |||| | || ||||| ||
Sbjct 2926 AGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCG 2867
Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGA 110272
| || |||| | || ||| | || ||| |||| ||||||| || | || |
Sbjct 2866 TTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATACGTTTTA---TCTTGCTTTA 2810
Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332
|| | || | |||||| || || ||||||||||| | ||||| || | |
Sbjct 2809 CAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGAAT 2750
Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392
| |||| |||||| || |||| |||||||| |||||| || | |||| ||||||
Sbjct 2749 ACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTAC 2690
Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452
||| |||||||||||||| || ||||||||||| || |||||| ||| ||||
Sbjct 2689 TTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACT 2630
Query 110453 TGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCT 110512
|| || || ||| | || || ||| | || | |||| || | ||
Sbjct 2629 CGATGATCGCGAACCACAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCT 2570
Query 110513 CGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCT 110572
||||| ||||||| | ||| || || | || || ||| | ||||| |
Sbjct 2569 CGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAAT 2510
Query 110573 TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAG 110632
|| ||||| | ||| ||| || || | |||| || | |||||||||||| || |
Sbjct 2509 CGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCG 2450
Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692
| ||||||| || |||| | ||| ||| ||| ||||||| | || |||
Sbjct 2449 GTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCT 2390
Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752
||| || | ||| || | | ||| ||||| ||||| ||||||| |||| | ||
Sbjct 2389 TTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTC 2330
Query 110753 ----CCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808
|||| | | || |||| | || || ||||| || ||| | || | |||
Sbjct 2329 CAGGCCTTTTGTTG-CCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGC 2271
Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACG 110867
|| || | | ||| | || ||| ||||| || || | || | || || ||
Sbjct 2270 ATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTC-CCTTCGCGCG 2212
Query 110868 AATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGT 110927
||| ||| | | || ||||| ||||| ||| |||| ||| | ||||| | |
Sbjct 2211 GATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTT 2152
Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987
|| ||| | |||||||| ||||| ||| | ||| | ||||| || |||||
Sbjct 2151 CAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGA 2092
Query 110988 CATCTGAGGACGAGGCGTTCCCGC 111011
| |||||| || |||| ||||
Sbjct 2091 GAGCTGAGGCCGCTGCGTAGCCGC 2068
>seq24817
Length=28059
Score = 111 bits (122), Expect = 2e-19
Identities = 320/480 (67%), Gaps = 18/480 (4%)
Strand=Plus/Plus
Query 11490 CACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGAC 11549
||| | ||||| |||||||| || || || || || || || | || ||||| || ||
Sbjct 8490 CACGTAAATCTGTCGATCGAAGCGTCCCGGTCGCAGCAGCGCCTTGTCTAGAATGTCCAC 8549
Query 11550 ACGGTTTGTAGCGGCAATGACTACAATGCCAGTC-TCAT--TGTCGAAACCGTCCATTTC 11606
||||| || ||||| | || || | || || || | ||| || |||||||| ||
Sbjct 8550 CCGGTTGGTGGCGGCCAGCACGACCA---CATTCGTCGTCGTGTTAAATCCGTCCATCTC 8606
Query 11607 TGTGAGAAGCTGGTTGATCGTCTGTTCAC--GCTCATCGTTGGAGGGCATACCACCTGCC 11664
| || |||||||||| || ||||| | |||| || || | | | | ||||
Sbjct 8607 TACCAGCAGCTGGTTGA--GTGTGTTCTCCTGCTCCGAGT-GGCCGCCGAAGCTTTTGCC 8663
Query 11665 GAACGC---TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTG 11721
| ||| ||| | || || || || || ||||||||||| | || |||||| | |
Sbjct 8664 -ACCGCGCTTTCGT-CCTACGGCATCGATTTCATCGATGAAGAGAATGCACGGTGCGCTT 8721
Query 11722 GCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCA 11781
|||||| |||| | || ||||||||| || ||| || || || ||||| ||
Sbjct 8722 TTGCGTGCCATGGCGAACATGTCGCGTACACGCGACGGTCCCACGCCGACAAACATTTCC 8781
Query 11782 ACGAAGTTTGCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCG 11840
| || | | | || ||| | |||||||||||| || | ||||| || | ||
Sbjct 8782 AAAAACTCCGACCCGGA-CACGGTAATGAAGGGAACGTTTGCTTCACCTGCCGTAGCCTT 8840
Query 11841 AGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTT 11900
|| || ||||| ||||||||||| || | ||| | | | |||||| ||| || ||
Sbjct 8841 TGCAAGCAGAGTTTTACCCGTACCCGGGGGACCGGTCAACATGGCGCCCTTGGGAATTTT 8900
Query 11901 GGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTC 11960
||||| | | ||| ||| ||| || |||||||||| |||| |||| || |||
Sbjct 8901 CGCACCGAGATCGATGTATTGCTGAGGGTTTTTGAGGAAGTTTACAAACTCCATAATTTC 8960
>seq8435
Length=16072
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/174 (72%), Gaps = 4/174 (2%)
Strand=Plus/Minus
Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531
|||||| ||||| || |||||||| ||||| ||| | || ||||| ||| ||| | ||
Sbjct 11172 AGGATGCTATGGCCGAGTGGCACCACGTTCCGGTCTCGCAGTGAAAAACTTCATCGATGT 11113
Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591
||||| || ||| ||||| || ||| || | ||| ||| || || ||||||||
Sbjct 11112 GGGTGCCGGCGTCGTCGATGAGGACTATCGCGGTAACGTCGGAGTTGTGCTGTTCAATCA 11053
Query 158592 T--GGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643
|||| | | | || || || ||||| || ||||||||||||||| || ||
Sbjct 11052 CTCGGAGGCGA--ATTTCGAAGTGAAGAAAGGCGATCGCATCGCACAGTTTATT 11001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588752417348200
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