Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq25975 140 4e-28 seq24817 111 2e-19 seq8435 93.3 5e-14 >seq25975 Length=7706 Score = 140 bits (154), Expect = 4e-28 Identities = 957/1524 (63%), Gaps = 42/1524 (3%) Strand=Plus/Minus Query 109506 CGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC-TTTT 109564 ||| || ||||||||||| || ||| ||||| || ||||| | |||| ||| |||| Sbjct 3567 CGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATG---CACGTTTT 3511 Query 109565 GGCTAA--TTTCCCAGACAGTCTTGTACAAATTCTTGATATCAT-CGGGAATGTCCACGA 109621 || | | ||||| || || ||||| | || || || | ||||| ||| | | Sbjct 3510 CACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCT-CAA 3452 Query 109622 TGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGA----CCAG 109677 | |||||||| || ||| ||| || | || ||| || | |||| ||| Sbjct 3451 TCTTTTGAATTGATCCATTG---TTCGACAGAATCTCGTTCTTCA-TATCGAGATCCCAT 3396 Query 109678 AGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCA 109737 | || | || | ||||| | | ||||| | ||| ||||| ||| ||||| | Sbjct 3395 AATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGAT 3336 Query 109738 AGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGG 109797 || ||||| ||| | ||| | ||||||||| ||||| | ||||||||||| || Sbjct 3335 AGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGA 3276 Query 109798 ATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC---C 109854 ||||| || || ||||| || ||||| || |||| || || || |||| ||| | Sbjct 3275 ATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGC 3216 Query 109855 TTCG-TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTC 109913 || | | ||| | ||| | | || || || || || | | | ||| Sbjct 3215 TTGGCTATTTTTTCCTTCA---ACTCCGACCAGTTCC-----ACAGCTCAGTC--GGCTC 3166 Query 109914 ACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTC 109973 | |||||| || || || | |||| | | ||| ||||| | | | || Sbjct 3165 CTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTCGTACGTTTC 3106 Query 109974 GTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGT 110033 ||||| || ||| |||||||||| | ||| || ||||| | ||| || || Sbjct 3105 GTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGT 3046 Query 110034 CTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGA-AGACCACAAA 110092 || || || || |||| ||| ||| || | ||| | ||| || || || Sbjct 3045 TTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAA 2986 Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152 || | ||| |||| || | ||||||||||| | ||| ||||| || || |||||| | Sbjct 2985 GA-TGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGG 2927 Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212 |||| ||| || || || ||||| || |||| | || ||||| || Sbjct 2926 AGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCG 2867 Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGA 110272 | || |||| | || ||| | || ||| |||| ||||||| || | || | Sbjct 2866 TTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATACGTTTTA---TCTTGCTTTA 2810 Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332 || | || | |||||| || || ||||||||||| | ||||| || | | Sbjct 2809 CAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGAAT 2750 Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392 | |||| |||||| || |||| |||||||| |||||| || | |||| |||||| Sbjct 2749 ACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTAC 2690 Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452 ||| |||||||||||||| || ||||||||||| || |||||| ||| |||| Sbjct 2689 TTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACT 2630 Query 110453 TGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCT 110512 || || || ||| | || || ||| | || | |||| || | || Sbjct 2629 CGATGATCGCGAACCACAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCT 2570 Query 110513 CGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCT 110572 ||||| ||||||| | ||| || || | || || ||| | ||||| | Sbjct 2569 CGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAAT 2510 Query 110573 TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAG 110632 || ||||| | ||| ||| || || | |||| || | |||||||||||| || | Sbjct 2509 CGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCG 2450 Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692 | ||||||| || |||| | ||| ||| ||| ||||||| | || ||| Sbjct 2449 GTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCT 2390 Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752 ||| || | ||| || | | ||| ||||| ||||| ||||||| |||| | || Sbjct 2389 TTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTC 2330 Query 110753 ----CCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 |||| | | || |||| | || || ||||| || ||| | || | ||| Sbjct 2329 CAGGCCTTTTGTTG-CCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGC 2271 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACG 110867 || || | | ||| | || ||| ||||| || || | || | || || || Sbjct 2270 ATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTC-CCTTCGCGCG 2212 Query 110868 AATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGT 110927 ||| ||| | | || ||||| ||||| ||| |||| ||| | ||||| | | Sbjct 2211 GATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTT 2152 Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987 || ||| | |||||||| ||||| ||| | ||| | ||||| || ||||| Sbjct 2151 CAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGA 2092 Query 110988 CATCTGAGGACGAGGCGTTCCCGC 111011 | |||||| || |||| |||| Sbjct 2091 GAGCTGAGGCCGCTGCGTAGCCGC 2068 >seq24817 Length=28059 Score = 111 bits (122), Expect = 2e-19 Identities = 320/480 (67%), Gaps = 18/480 (4%) Strand=Plus/Plus Query 11490 CACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGAC 11549 ||| | ||||| |||||||| || || || || || || || | || ||||| || || Sbjct 8490 CACGTAAATCTGTCGATCGAAGCGTCCCGGTCGCAGCAGCGCCTTGTCTAGAATGTCCAC 8549 Query 11550 ACGGTTTGTAGCGGCAATGACTACAATGCCAGTC-TCAT--TGTCGAAACCGTCCATTTC 11606 ||||| || ||||| | || || | || || || | ||| || |||||||| || Sbjct 8550 CCGGTTGGTGGCGGCCAGCACGACCA---CATTCGTCGTCGTGTTAAATCCGTCCATCTC 8606 Query 11607 TGTGAGAAGCTGGTTGATCGTCTGTTCAC--GCTCATCGTTGGAGGGCATACCACCTGCC 11664 | || |||||||||| || ||||| | |||| || || | | | | |||| Sbjct 8607 TACCAGCAGCTGGTTGA--GTGTGTTCTCCTGCTCCGAGT-GGCCGCCGAAGCTTTTGCC 8663 Query 11665 GAACGC---TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTG 11721 | ||| ||| | || || || || || ||||||||||| | || |||||| | | Sbjct 8664 -ACCGCGCTTTCGT-CCTACGGCATCGATTTCATCGATGAAGAGAATGCACGGTGCGCTT 8721 Query 11722 GCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCA 11781 |||||| |||| | || ||||||||| || ||| || || || ||||| || Sbjct 8722 TTGCGTGCCATGGCGAACATGTCGCGTACACGCGACGGTCCCACGCCGACAAACATTTCC 8781 Query 11782 ACGAAGTTTGCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCG 11840 | || | | | || ||| | |||||||||||| || | ||||| || | || Sbjct 8782 AAAAACTCCGACCCGGA-CACGGTAATGAAGGGAACGTTTGCTTCACCTGCCGTAGCCTT 8840 Query 11841 AGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTT 11900 || || ||||| ||||||||||| || | ||| | | | |||||| ||| || || Sbjct 8841 TGCAAGCAGAGTTTTACCCGTACCCGGGGGACCGGTCAACATGGCGCCCTTGGGAATTTT 8900 Query 11901 GGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTC 11960 ||||| | | ||| ||| ||| || |||||||||| |||| |||| || ||| Sbjct 8901 CGCACCGAGATCGATGTATTGCTGAGGGTTTTTGAGGAAGTTTACAAACTCCATAATTTC 8960 >seq8435 Length=16072 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 |||||| ||||| || |||||||| ||||| ||| | || ||||| ||| ||| | || Sbjct 11172 AGGATGCTATGGCCGAGTGGCACCACGTTCCGGTCTCGCAGTGAAAAACTTCATCGATGT 11113 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 ||||| || ||| ||||| || ||| || | ||| ||| || || |||||||| Sbjct 11112 GGGTGCCGGCGTCGTCGATGAGGACTATCGCGGTAACGTCGGAGTTGTGCTGTTCAATCA 11053 Query 158592 T--GGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTT 158643 |||| | | | || || || ||||| || ||||||||||||||| || || Sbjct 11052 CTCGGAGGCGA--ATTTCGAAGTGAAGAAAGGCGATCGCATCGCACAGTTTATT 11001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588752417348200