Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 113 5e-20
seq8435 86.0 7e-12
>seq25975
Length=7706
Score = 113 bits (124), Expect = 5e-20
Identities = 420/654 (64%), Gaps = 11/654 (2%)
Strand=Plus/Minus
Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228
||||| |||||||| || ||||| | | || ||| |||||||| || || | |||
Sbjct 3086 GCCAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTC 3027
Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288
| || | || || || || | | ||||| || || || |||| || |
Sbjct 3026 AGCTTTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATT 2967
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345
|| |||||||| | ||| || |||| ||| ||||| || || ||| || |||
Sbjct 2966 CCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAG---CGCTTAGCCTCCGGG 2910
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405
|| ||||| | || ||||||| ||| ||||| || || ||||| | || |
Sbjct 2909 ACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACT 2850
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
|| | || || | ||||| | || | |||| || ||| || | | ||
Sbjct 2849 TCCTTCAGCTTGGTAAAATCATACGTTTTA---TCTTGCTTTACAAACATGTTCAAAGCA 2793
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
|| || |||| |||||| || || || ||||| | ||||| | |||||| ||
Sbjct 2792 ATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGAATACTCCACAATTTCGGTG 2733
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||| |||||||| ||||| || || | ||||| || ||||| || ||||| |||
Sbjct 2732 CACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCA 2673
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645
|||||||| |||||||| || ||||| ||| ||| |||| || || || ||||
Sbjct 2672 TCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCAC 2613
Query 106646 ACATCGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704
| || ||| || || || | || ||||| ||||||| ||||| ||
Sbjct 2612 AAGTCCTGTGCTTTGAC-CTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAG 2554
Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764
|| ||||| |||||| || || | ||||| || | || |||||| | ||
Sbjct 2553 CTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAG 2494
Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818
||| || | |||| || ||||||||||| || || || ||||||||
Sbjct 2493 GCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAG 2440
>seq8435
Length=16072
Score = 86.0 bits (94), Expect = 7e-12
Identities = 116/160 (73%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
||||| || || |||||||| ||||||||||| ||||| | || | || |||||
Sbjct 11165 TATGGCCGAGTGGCACCACGTTCCGGTCTCGCAGTGAAAAACTTCATCGATGTGGGTGCC 11106
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCAC--GGAG 155161
|| || | ||| |||||| ||| | ||| ||| || || ||||||||| ||||
Sbjct 11105 GGCGTCGTCGATGAGGACTATCGCGGTAACGTCGGAGTTGTGCTGTTCAATCACTCGGAG 11046
Query 155162 ACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACA 155201
| || || || || |||||||| ||||||||||||||
Sbjct 11045 GCGAAT--TTCGAAGTGAAGAAAGGCGATCGCATCGCACA 11008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589756835913560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |