Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq734 138 7e-28 seq29242 131 1e-25 seq24704 109 4e-19 >seq734 Length=4884 Score = 138 bits (152), Expect = 7e-28 Identities = 150/197 (76%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| |||||||||||||| ||| | || |||| |||||||| ||||||||||| Sbjct 46 TTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAA 105 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||| ||| | || | |||||||| || |||||| ||||| | Sbjct 106 GATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCTTGGCCTTGAC--A 163 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || |||| || | |||||| |||| ||| ||||| ||||| || ||||| ||| Sbjct 164 TTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTC 223 Query 34968 ACAAAGATCTGCATATT 34984 ||||| ||||||||||| Sbjct 224 ACAAAAATCTGCATATT 240 >seq29242 Length=5648 Score = 131 bits (144), Expect = 1e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| || | ||| ||| |||||||||||||||||||| ||| | || |||| || Sbjct 5433 AACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTC 5492 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| ||||||||||| || || || ||||| ||| | || | |||||||| || Sbjct 5493 CAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTG 5552 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| ||||| || || |||| || | |||||| |||| || ||||| Sbjct 5553 AATCTTGGCCTTGAC--ATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTC 5610 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || || |||||||| ||||||||| Sbjct 5611 TTTCCGGTCAGCGTTTTCACAAAAATCTGCATA 5643 >seq24704 Length=53625 Score = 109 bits (120), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| || || | ||| |||| |||||||| || ||||| || Sbjct 37667 TCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAG 37608 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || |||| | ||||||||||| |||||| || || || Sbjct 37607 ATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 37550 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || || ||| || || | ||| ||||| || |||||||| || || | Sbjct 37549 TCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGA 37490 Query 34969 CAAAGATCTGCATATT 34984 | ||||||||||| || Sbjct 37489 CGAAGATCTGCATCTT 37474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324513445901832