Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq23923 113 4e-19
seq29242 89.7 4e-12
>seq23923
Length=9809
Score = 113 bits (124), Expect = 4e-19
Identities = 125/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723
||||||||||||| || ||| | || |||||||||||| | || ||||| ||||| ||||
Sbjct 1903 TTGATTTTTCTTCGCCTAATGTAGCGAAAGAAATGCATGTCGGTCATTTACGTTCAACCA 1962
Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCA 930783
| ||||| || || | || |||| | || | | || | | || | |||| |||
Sbjct 1963 TCATTGGCGATTCAATTTGCCGATTTTTGGAGTTTCTCGGGCATGATGTACTTCGAATCA 2022
Query 930784 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTAT 930830
| || || || || |||||||| || |||||||||||||||||| ||
Sbjct 2023 ACCACATCGGCGACTGGGGAACGCAGTTTGGTATGTTAATTGCTCAT 2069
>seq29242
Length=5648
Score = 89.7 bits (98), Expect = 4e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
||||| || || ||||| ||||| ||| || ||| || || || | || || |
Sbjct 5425 AGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGG 5484
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| || || ||||||||||| || || | |||||||| || || ||||| ||
Sbjct 5485 CCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCC 5544
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436
||||| ||||| || || || |||||| ||||| | | | ||||||||
Sbjct 5545 TTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTG 5604
Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| || || || || || ||||| || ||||| ||||||
Sbjct 5605 ATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCATA 5643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4027689950315810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |