Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq8435 143 2e-29 seq734 111 1e-19 seq24704 98.7 8e-16 seq9735 96.9 3e-15 seq29242 93.3 3e-14 seq3879 87.8 1e-12 seq25727 84.2 2e-11 >seq8435 Length=16072 Score = 143 bits (158), Expect = 2e-29 Identities = 210/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 8991 TTAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGT 9050 |||||| || ||||| || ||||| ||||| | || || | || ||||| | | Sbjct 10905 TTAATTGGTGCCGGTCGATCCAAAACCTCCGGCCCCACGTTCCGTATCAGTAAGTGTCGG 10964 Query 9051 AACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCC 9110 || |||| ||| ||||| |||| ||||||||| || || || || | || || Sbjct 10965 AAGCTCTTCCAAATCCGGATATGCTATTTTTTCACAAATAAACTGTGCGATGCGATCGCC 11024 Query 9111 CTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCT 9170 || ||||| | || | | || || |||||||||||||| ||||| |||||||| | Sbjct 11025 TTTCTTCACTTCGAAATTCGCCTCCGAGTGATTGAACAGCACAACTCCGACGTTACCGCG 11084 Query 9171 GTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGA 9230 || |||||||||| || || |||||||| |||||||||| || || || || || || Sbjct 11085 ATAGTCCTCATCGACGACGCCGGCACCCACATCGATGAAGTTTTTCACTGCGAGACCGGA 11144 Query 9231 GCGGGGCGCGATTCGACCGTAGCATCCCACCGGTAATTGCACCCGCAAGTCGGTCAT 9287 || || || | ||| || |||||||| |||| | || || | | ||||||||| Sbjct 11145 ACGTGGTGCCACTCGGCCATAGCATCCTTCCGGCACCTGAACTTGAATGTCGGTCAT 11201 >seq734 Length=4884 Score = 111 bits (122), Expect = 1e-19 Identities = 169/234 (72%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGT-GCTCTCTTTTTGAATATTGTAATCAG 48597 ||| ||| | | ||| | ||||| ||| | ||| | || | | ||| ||||||||||| | Sbjct 2616 GCCACCCTTCAACCGAAGCACCAGATGCATCGTCGATC-CATGTTGGATATTGTAATCGG 2674 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 | | | ||| | || |||| ||||||||||||||| || | |||||| ||||||| || Sbjct 2675 AGATGATCCGACCATCATCCAGCTGCTTACCGGCAAAGATAATTCGCTGCTGATCCGGGG 2734 Query 48658 GAACGCC--CTCCTTGTCGCTAATCTTTTGTTTTACAGAACC--CACAGACTCTGACGCC 48713 || || | | |||| ||| ||||||||| | || ||| | || ||||| Sbjct 2735 CAATTCCTTCACGTTGT-TCTA---TTTTGTTTTTAATGTCCAACACCGTTTCCGACGCG 2790 Query 48714 TCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||||| | || ||||| ||||| || || ||||||||||| ||||||||| Sbjct 2791 ATCACCTCAAGAGTGATCGTCTTTCCAGTTAACGTTTTTACAAAGATCTGCATC 2844 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || ||| || || || || || || || || || | || | || ||| Sbjct 29 ACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 88 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| |||||||| ||||| ||||| ||||| | || | |||||||| || | Sbjct 89 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 148 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || | ||| ||||| | || || || ||| Sbjct 149 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTT 208 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| |||||| |||||||||||||| Sbjct 209 CCGGTCAGAGTTTTCACAAAAATCTGCAT 237 >seq24704 Length=53625 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| ||| || || |||||| || || ||||| || || || | || Sbjct 37694 AGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGT 37635 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||||||||| || ||||| ||||| ||||||| || | |||||| Sbjct 37634 CCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCC 37575 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| ||||| | ||| Sbjct 37574 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 37515 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || ||||| | ||||| || || ||||||||| || Sbjct 37514 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 37473 >seq9735 Length=15595 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||| ||| || || || || ||||||||||| || || ||| | ||| Sbjct 4827 AGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGA 4768 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| |||||||| ||||| ||||| ||||| | |||| ||| ||| Sbjct 4767 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCC 4708 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| || ||| | | | || || | ||| ||||| | || Sbjct 4707 TTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 4648 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | ||||| || ||||||||||| Sbjct 4647 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610 >seq29242 Length=5648 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || ||| || || ||||| || || || || || | || | || ||| Sbjct 5434 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 5493 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| |||||||| ||||| ||||| ||||| | || | |||||||| || | Sbjct 5494 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 5553 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || | ||| ||||| | || || || ||| Sbjct 5554 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTT 5613 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| ||||| |||||||||||||| Sbjct 5614 CCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq3879 Length=3897 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || |||||||| || | | | || | || |||| |||||||||||| || Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| ||||| ||||| | |||| |||||||||||| ||||| || || Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 3763 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||| ||||||| || || || || || |||| ||||| || Sbjct 3762 CTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTTCAC 3703 Query 48755 AAAAATCTGCATCGTG 48770 || ||||||||| || Sbjct 3702 GAAGATCTGCATCCTG 3687 >seq25727 Length=29774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 7802 ACCCTAGGTACGCGTTGGAGCAAGTGCGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTA 7861 |||| | |||||| | ||| | |||||| ||| | | || ||||||| | Sbjct 9020 ACCCGAACTACGCGATCGAGGCTGATCGTCTGAAGTCGTACGATGATTGGCCGACGTCCC 8961 Query 7862 TAAAGCAGAAACCAAAGCAGCTTGCCGAAGCTGGATTATACTACACGGGCCGCGGTGATA 7921 | |||||||| ||||||||||| ||| || ||||| | |||||| || | ||| Sbjct 8960 TGAAGCAGAAGCCAAAGCAGCTAAGCGATGCCGGATTTTTCTACACTGGAATGAGCGATC 8901 Query 7922 TGACAAAGTGTTTCTACTGTGACGGGGGTCTCAAAGATTGGGAGGAAAACGATATACCGT 7981 | |||||| ||| ||||| ||| || || || || |||||| | ||||| |||| Sbjct 8900 GGGTAAAGTGCTTCAGCTGTGGCGGCGGGCTTAAGGACTGGGAGCAGGACGATGATCCGT 8841 Query 7982 GGGAGCAACACGCGCGCTGGT 8002 || |||| |||||| ||||| Sbjct 8840 GGCAGCAGCACGCGATCTGGT 8820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380796606542187