Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq8435 143 2e-29
seq734 111 1e-19
seq24704 98.7 8e-16
seq9735 96.9 3e-15
seq29242 93.3 3e-14
seq3879 87.8 1e-12
seq25727 84.2 2e-11
>seq8435
Length=16072
Score = 143 bits (158), Expect = 2e-29
Identities = 210/297 (71%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 8991 TTAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGT 9050
|||||| || ||||| || ||||| ||||| | || || | || ||||| | |
Sbjct 10905 TTAATTGGTGCCGGTCGATCCAAAACCTCCGGCCCCACGTTCCGTATCAGTAAGTGTCGG 10964
Query 9051 AACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCC 9110
|| |||| ||| ||||| |||| ||||||||| || || || || | || ||
Sbjct 10965 AAGCTCTTCCAAATCCGGATATGCTATTTTTTCACAAATAAACTGTGCGATGCGATCGCC 11024
Query 9111 CTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCT 9170
|| ||||| | || | | || || |||||||||||||| ||||| |||||||| |
Sbjct 11025 TTTCTTCACTTCGAAATTCGCCTCCGAGTGATTGAACAGCACAACTCCGACGTTACCGCG 11084
Query 9171 GTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGA 9230
|| |||||||||| || || |||||||| |||||||||| || || || || || ||
Sbjct 11085 ATAGTCCTCATCGACGACGCCGGCACCCACATCGATGAAGTTTTTCACTGCGAGACCGGA 11144
Query 9231 GCGGGGCGCGATTCGACCGTAGCATCCCACCGGTAATTGCACCCGCAAGTCGGTCAT 9287
|| || || | ||| || |||||||| |||| | || || | | |||||||||
Sbjct 11145 ACGTGGTGCCACTCGGCCATAGCATCCTTCCGGCACCTGAACTTGAATGTCGGTCAT 11201
>seq734
Length=4884
Score = 111 bits (122), Expect = 1e-19
Identities = 169/234 (72%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGT-GCTCTCTTTTTGAATATTGTAATCAG 48597
||| ||| | | ||| | ||||| ||| | ||| | || | | ||| ||||||||||| |
Sbjct 2616 GCCACCCTTCAACCGAAGCACCAGATGCATCGTCGATC-CATGTTGGATATTGTAATCGG 2674
Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657
| | | ||| | || |||| ||||||||||||||| || | |||||| ||||||| ||
Sbjct 2675 AGATGATCCGACCATCATCCAGCTGCTTACCGGCAAAGATAATTCGCTGCTGATCCGGGG 2734
Query 48658 GAACGCC--CTCCTTGTCGCTAATCTTTTGTTTTACAGAACC--CACAGACTCTGACGCC 48713
|| || | | |||| ||| ||||||||| | || ||| | || |||||
Sbjct 2735 CAATTCCTTCACGTTGT-TCTA---TTTTGTTTTTAATGTCCAACACCGTTTCCGACGCG 2790
Query 48714 TCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|||||| | || ||||| ||||| || || ||||||||||| |||||||||
Sbjct 2791 ATCACCTCAAGAGTGATCGTCTTTCCAGTTAACGTTTTTACAAAGATCTGCATC 2844
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || ||| || || || || || || || || || | || | || |||
Sbjct 29 ACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 88
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| |||||||| ||||| ||||| ||||| | || | |||||||| || |
Sbjct 89 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 148
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | | || || | ||| ||||| | || || || |||
Sbjct 149 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTT 208
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| |||||| ||||||||||||||
Sbjct 209 CCGGTCAGAGTTTTCACAAAAATCTGCAT 237
>seq24704
Length=53625
Score = 98.7 bits (108), Expect = 8e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| ||| || || |||||| || || ||||| || || || | ||
Sbjct 37694 AGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGT 37635
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||||||||| || ||||| ||||| ||||||| || | ||||||
Sbjct 37634 CCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCC 37575
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | || || | ||| ||||| | |||
Sbjct 37574 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 37515
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || || ||||| | ||||| || || ||||||||| ||
Sbjct 37514 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 37473
>seq9735
Length=15595
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||| ||| || || || || ||||||||||| || || ||| | |||
Sbjct 4827 AGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGA 4768
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| |||||||| ||||| ||||| ||||| | |||| ||| |||
Sbjct 4767 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCC 4708
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || ||||| || ||| | | | || || | ||| ||||| | ||
Sbjct 4707 TTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 4648
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | ||||| || |||||||||||
Sbjct 4647 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610
>seq29242
Length=5648
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || ||| || || ||||| || || || || || | || | || |||
Sbjct 5434 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 5493
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||| |||||||| ||||| ||||| ||||| | || | |||||||| || |
Sbjct 5494 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 5553
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | | || || | ||| ||||| | || || || |||
Sbjct 5554 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTT 5613
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| ||||| ||||||||||||||
Sbjct 5614 CCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq3879
Length=3897
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || |||||||| || | | | || | || |||| |||||||||||| ||
Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| ||||| ||||| | |||| |||||||||||| ||||| || ||
Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 3763
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || | ||| ||||||| || || || || || |||| ||||| ||
Sbjct 3762 CTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTTCAC 3703
Query 48755 AAAAATCTGCATCGTG 48770
|| ||||||||| ||
Sbjct 3702 GAAGATCTGCATCCTG 3687
>seq25727
Length=29774
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 7802 ACCCTAGGTACGCGTTGGAGCAAGTGCGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTA 7861
|||| | |||||| | ||| | |||||| ||| | | || ||||||| |
Sbjct 9020 ACCCGAACTACGCGATCGAGGCTGATCGTCTGAAGTCGTACGATGATTGGCCGACGTCCC 8961
Query 7862 TAAAGCAGAAACCAAAGCAGCTTGCCGAAGCTGGATTATACTACACGGGCCGCGGTGATA 7921
| |||||||| ||||||||||| ||| || ||||| | |||||| || | |||
Sbjct 8960 TGAAGCAGAAGCCAAAGCAGCTAAGCGATGCCGGATTTTTCTACACTGGAATGAGCGATC 8901
Query 7922 TGACAAAGTGTTTCTACTGTGACGGGGGTCTCAAAGATTGGGAGGAAAACGATATACCGT 7981
| |||||| ||| ||||| ||| || || || || |||||| | ||||| ||||
Sbjct 8900 GGGTAAAGTGCTTCAGCTGTGGCGGCGGGCTTAAGGACTGGGAGCAGGACGATGATCCGT 8841
Query 7982 GGGAGCAACACGCGCGCTGGT 8002
|| |||| |||||| |||||
Sbjct 8840 GGCAGCAGCACGCGATCTGGT 8820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380796606542187
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |